XLOC_000990 (si:dkey-79f11.5)


Basic Information

Item Value
gene id XLOC_000990
gene name si:dkey-79f11.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 7993632 ~ 8000428 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001571
AACTGGAGACACCATGGAGGTCATTTGACTGGGGACAAAAAGAAGCCCTGAGAAAATGGCTGGAAAACTTCACTCTGAGTGATCCAAATGTAAAAGACATCAAGATACTGGTAGTTGGACCATCAGGAGCAGGAAAGTCCAGCTTTATAAACTCCATCAACAGTGTCTTTCAAAGACGGATCTCCTCTAAAGCACTAGTTAACTCTGCTGGAGGAGACAATCATAGTTTTACAGAAAAGGTAGGTATTTActacttaaaaaaagtttaatgcaGTGGGATTTTAATCTAATTGTTTGAGAATTTATTTGAAAATGGTTTGCAAAATATCTGGTCTTGATTTCTAGCTCAAGAGACTTACCATCAAAAATGGGAAAACATCTTTGCCCTTCGTCTTCTTCGACATCATGGGTTTAGAAGCTGAAGAATTTCATGGATCAAAAACAGAAGATATCATCAAAGCTGTGTTTGGCCATGTGAAAGACGGCTATAAATTCAACGAGGAGCAGTCAATCGATTATAAGGATCAACATTACACCAGTGACCCCAGCCTCTCCGACCAGTGTTTCTGTGTGGTTTACATCATAGATGGAAAAATAGTTCAGTACACAGAAGATCGACTGATTAAAAAGTTGAAGATCATCCGCAAGAAAATCAGTGATAAGGGCATTGCTCAAGTGGTTGTCATGACCAAAGTGGATGAAGCATGTCCACTGGTCAAAAATGATCTAAGGAAGGTCTACTCGAGCAAGAAGATCAAAGAGAAGATGGAGCTGTGCAGTGCCCACACTGGTGTGCCAATGACAAACATCTTCCCAGTGAAGAATTACCATGATGAGATCGACACAAAAGATGATGTTGATGTTCTGATACTGAAGGCTCTTGAACAGATTGTTCACAATGCCAATGACAGATTGGAGGATAATGAAACCTACtgaaatggtaataatacatGTAATTCTTTAAACGCTAAACAATTTCTTTATCTGTTCAAATTATCTGTCAGTTTCTTTTATCTTTAGCTGGAGTACCCATCAGACTCACTAGAGGGCActtcatatacagtatgtacaccaGACATTCTCCCTGACTACACATCCCATCATGCTTTGTGCATAATCAGACTTTAATTACCTGCTATAGCTGATATCAATCTGGACATTGACATTTACACCGACTGCACACACCATACAGTGTAAGCACCACATTCACACTCAGTCTTGTATTTCTGTGCAATTAGTATTTTCCTGGTTTATTTCTTTTCGTGGATATTGATTGAACCTCTGCCAGTTTTTTTGGATTACTCTCTTTGGGTTacctttttttttgtactgtttgCTCCTGTTGACCCTAGCCTGTCTGACCATCCTTGTTTAAATAAAGCTGCGTTTGTAAGTTCATGTATGGCATGTATTTTGAATGAGTGTGCTGCCAGTCAAGGGTgtgaagaaaaaaagaacaagGCATTAAACTTTATGGTTACTCTGTGTTTGTCATCTAATGACTCaattacaaaacataaataaaacataacattGTGTTAGAAGTGGGAAATTAGAAATGAGGTTCTCATACTGTCCTGTAGGGCCAGTGttctgctgattttagctccaacttgcctcgccacacctgcaaggatgtttcttgaAAGAGTGTGAGTTGATTTGTGCTAATCTTTTTAgagattctattctattctattttaaaatGGAAAGCCAATGAAGAGAAACCAGTATGAGTGTAATGTGTTCTCATATAAGTATTCCTGTCAACAAACATGTGGTGGCATGTAAGGGAGGCATGGGTAACTAATAAAGGGCATTACAATAATCCAGATCAAgtcaaataaaatatgtataccTCCTTCGAAAAGA
>TCONS_00001572
GAGATACAAGGCAACAGTGTTCCAGGATCAAGCTGATAGATTCAAGGACGAAAAACAAAATGGGATCATCACAatcacagaaacaaaaaaaacaacaaccatcaAGTCCAGAACTGGAGACACCATGGAGGTCATTTGACTGGGGACAAAAAGAAGCCCTGAGAAAATGGCTGGAAAACTTCACTCTGAGTGATCCAAATGTAAAAGACATCAAGATACTGGTAGTTGGACCATCAGGAGCAGGAAAGTCCAGCTTTATAAACTCCATCAACAGTGTCTTTCAAAGACGGATCTCCTCTAAAGCACTAGTTAACTCTGCTGGAGGAGACAATCATAGTTTTACAGAAAAGCTCAAGAGACTTACCATCAAAAATGGGAAAACATCTTTGCCCTTCGTCTTCTTCGACATCATGGGTTTAGAAGCTGAAGAATTTCATGGATCAAAAACAGAAGATATCATCAAAGCTGTGTTTGGCCATGTGAAAGACGGCTATAAATTCAACGAGGAGCAGTCAATCGATTATAAGGATCAACATTACACCAGTGACCCCAGCCTCTCCGACCAGTGTTTCTGTGTGGTTTACATCATAGATGGAAAAATAGTTCAGTACACAGAAGATCGACTGATTAAAAAGTTGAAGATCATCCGCAAGAAAATCAGTGATAAGGGCATTGCTCAAGTGGTTGTCATGACCAAAGTGGATGAAGCATGTCCACTGGTCAAAAATGATCTAAGGAAGGTCTACTCGAGCAAGAAGATCAAAGAGAAGATGGAGCTGTGCAGTGCCCACACTGGTGTGCCAATGACAAACATCTTCCCAGTGAAGAATTACCATGATGAGATCGACACAAAAGATGATGTTGATGTTCTGATACTGAAGGCTCTTGAACAGATTGTTCACAATGCCAATGACAGATTGGAGGATAATGAAACCTACtgaaatggtaataatacatGTAATTCTTTAAACGCTAAACAATTTCTTTATCTGTTCAAATTATCTGTCAGTTTCTTTTATCTTTAGCTGGAGTACCCATCAGACTCACTAGAGGGCActtcatatacagtatgtacaccaGACATTCTCCCTGACTACACATCCCATCATGCTTTGTGCATAATCAGACTTTAATTACCTGCTATAGCTGATATCAATCTGGACATTGACATTTACACCGACTGCACACACCATACAGTGTAAGCACCACATTCACACTCAGTCTTGTATTTCTGTGCAATTAGTATTTTCCTGGTTTATTTCTTTTCGTGGATATTGATTGAACCTCTGCCAGTTTTTTTGGATTACTCTCTTTGGGTTacctttttttttgtactgtttgCTCCTGTTGACCCTAGCCTGTCTGACCATCCTTGTTTAAATAAAGCTGCGTTTGTA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000075791

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001571 False 1872 mRNA 0.38 5 7993632 7998493
TCONS_00001572 True 1397 mRNA 0.40 7 7994112 8000428

Neighbor

gene id symbol gene type direction distance location
XLOC_000989 si:dkey-79f11.7 coding downstream 17863 7964276 ~ 7975769 (-)
XLOC_000988 si:dkey-79f11.8 coding downstream 42630 7946842 ~ 7951002 (-)
XLOC_000987 si:dkey-79f11.9 coding downstream 54118 7936270 ~ 7939514 (-)
XLOC_000986 si:dkey-79f11.10 coding downstream 62953 7924956 ~ 7930679 (-)
XLOC_000984 mmd2b coding downstream 72930 7908282 ~ 7920702 (-)
XLOC_000991 CR855320.3 coding upstream 1007 8001435 ~ 8012476 (-)
XLOC_000992 si:dkeyp-9d4.2 coding upstream 16641 8017069 ~ 8020589 (-)
XLOC_000993 si:dkeyp-9d4.3 coding upstream 21892 8022320 ~ 8101495 (-)
XLOC_000994 FAM83G coding upstream 127247 8127675 ~ 8141135 (-)
XLOC_000995 grapb coding upstream 164912 8165340 ~ 8192418 (-)
XLOC_000985 CR855320.6 non-coding downstream 73426 7920119 ~ 7920206 (-)
XLOC_000981 BX908756.3 non-coding downstream 149270 7771557 ~ 7844362 (-)
XLOC_000982 BX908756.2 non-coding downstream 191986 7801531 ~ 7801646 (-)
XLOC_000980 NA non-coding downstream 291776 7700023 ~ 7701856 (-)
XLOC_000975 NA non-coding downstream 439293 7545049 ~ 7554339 (-)
XLOC_000996 NA non-coding upstream 201962 8202390 ~ 8205228 (-)
XLOC_000998 NA non-coding upstream 504549 8504977 ~ 8510066 (-)
XLOC_001001 NA non-coding upstream 578727 8579155 ~ 8587359 (-)
XLOC_001002 NA non-coding upstream 612147 8612575 ~ 8625266 (-)
XLOC_001008 NA non-coding upstream 974072 8974500 ~ 8977963 (-)

Expression


Co-expression Network