XLOC_013675


Basic Information

Item Value
gene id XLOC_013675
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 49797934 ~ 49877562 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027448
GCAGAGTTGAGGGACACCTCAGGTCCTCACAGCACCTGTCATCAGTTTGGCACATGTATTAAGgatTGGTGCAGCCATTTCAGCTTTGCCATCTTCATTCAGACCTCTATTTATGTGCAAGAATGGAGTGTGAAGAGAAGCTGAGAGACATTAATTCCCCTGGCATGGAAACTCATCAGGGAGAATAATTGAATGGCTTGTCGTTTTCCAGATATATGGGTCAGAGCTGCCAGTTTCTTCCAGTTTTTCTTCACGCtgggttaaaaaagaaaaagaaaaaaacaggcaTTCCTGACGGCGGAGCAGACCTGAGTTGTACCTCTCCTGTGTGTGATGAGCCACGCATGTCTTCACACACAACCCTGCGCTCGGCTGCTGAAAAATGACACCGAAAGCTTCATTTACGGAGACCGGCAGCAAACGAGCGACACTTCCACGCTTTTCCTGCAATGACAGCGAAGGTTGAATCTGTGATTTGTGTTTTCCCCCTTTGCTGACAGACAGCTGTCTCTCCCGCACTTCATTTGATAAGCAGCCGCCGCTCTCCCTTTCCTCAAGCCATTTCTCTGAAAATAACCTGTCGCCTCATTTGTTTTACGTCGATTTCTAGCGCTATCGATTTGAGACCGGAGGGACATCATGTCCTGTTAGAGACCTTATCTAGTGCCGTTCTGCCTGTTGTGTAAAGCAACAAACTACAGATACTcagatttctgtaatttagtagtttttacacttatttattagatagttgtaaaaatgtgtactagtattgtcacgatactggaattcggcaccaatc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027448 True 802 lncRNA 0.45 3 49797934 49877562

Neighbor

gene id symbol gene type direction distance location
XLOC_013673 NA coding downstream 128922 49461269 ~ 49669012 (-)
XLOC_013674 NA coding downstream 246436 49549574 ~ 49551498 (-)
XLOC_013672 sb:cb81 coding downstream 479111 49309953 ~ 49318823 (-)
XLOC_013671 si:zfos-464b6.2 coding downstream 511413 49273989 ~ 49286521 (-)
XLOC_013669 NA coding downstream 670594 49124828 ~ 49127340 (-)
XLOC_013676 NA coding upstream 73170 49950732 ~ 49964921 (-)
XLOC_013677 abcc8b coding upstream 163287 50040849 ~ 50083408 (-)
XLOC_013678 NA coding upstream 217677 50095239 ~ 50105253 (-)
XLOC_013679 NA coding upstream 220972 50098534 ~ 50100153 (-)
XLOC_013680 loxl1 coding upstream 246735 50124297 ~ 50152689 (-)
XLOC_013384 BX323829.1 misc downstream 30255703 19542102 ~ 19542231 (-)
XLOC_013670 NA non-coding downstream 671184 49126165 ~ 49126750 (-)
XLOC_013668 NA non-coding downstream 675999 49118453 ~ 49121935 (-)
XLOC_013681 CU862078.1 non-coding upstream 475443 50353005 ~ 50524042 (-)
XLOC_013684 CU640433.1 non-coding upstream 828914 50706476 ~ 50707287 (-)

Expression


Co-expression Network