G20633



Basic Information


Item Value
gene id G20633
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 21437670 ~ 21437923 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU24063
AGGGGCAGCAGGCGGCTGTCAGCACATGGCTCTCTGGTTTCAGATCTACTGTGGCACTGGTCCCATAAAGGGGATGGCAGACATGACTCACCTACactacacagcaggacagggGGAGCTGTAATGGGCCCACAGACGCACAGACCTACCTCAGCTCCCAGTCACCCTCCAAGCCACTGACGTCATACGACCCAGATAGACATGCCTTCCGAAATAAAATAGCCTAACCCCCCatgaccaggagagagagagta

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU24063 True 254 lncRNA 0.44 1 21437670 21437923

Neighbor


gene id symbol gene type direction distance location
LOC110512702 LOC106573599 coding upstream 81812 21353302 ~ 21355858 (+)
LOC110507602 LOC106573596 coding upstream 134609 21271127 ~ 21303061 (+)
LOC110507530 LOC106573595 coding upstream 170016 21194656 ~ 21267654 (+)
LOC110507450 LOC106573594 coding upstream 246489 21148112 ~ 21191181 (+)
LOC110507137 LOC106573592 coding upstream 295819 21134277 ~ 21141851 (+)
LOC110507802 LOC106573603 coding downstream 167101 21605024 ~ 21631294 (+)
LOC110508215 LOC106573607 coding downstream 295671 21733594 ~ 21747189 (+)
LOC110508358 LOC106573608 coding downstream 341818 21779741 ~ 21785244 (+)
LOC110508526 bsg coding downstream 354533 21792456 ~ 21802903 (+)
LOC110508592 LOC106613751 coding downstream 371641 21809564 ~ 21911516 (+)
G20628 NA non-coding upstream 10699 21426738 ~ 21426971 (+)
G20622 NA non-coding upstream 17529 21419907 ~ 21420141 (+)
G20618 NA non-coding upstream 29531 21407937 ~ 21408139 (+)
G20616 NA non-coding upstream 32828 21404486 ~ 21404842 (+)
G20595 NA non-coding upstream 65114 21372324 ~ 21372556 (+)
G20634 NA non-coding downstream 201 21438124 ~ 21438327 (+)
G20637 NA non-coding downstream 3546 21441469 ~ 21441756 (+)
G20638 NA non-coding downstream 6160 21444083 ~ 21444320 (+)
G20741 NA non-coding downstream 21031 21458954 ~ 21459859 (+)
G20742 NA non-coding downstream 22141 21460064 ~ 21460375 (+)
G19400 NA other upstream 1127772 20309425 ~ 20309898 (+)
G19380 LOC100194703 other upstream 1160775 20276590 ~ 20276895 (+)
G19359 NA other upstream 1194795 20242645 ~ 20242875 (+)
G19083 NA other upstream 1521838 19915586 ~ 19915832 (+)
LOC110503939 LOC106573564 other upstream 1572065 19863734 ~ 19865619 (+)
G20773 NA other downstream 129622 21567545 ~ 21568188 (+)
G23109 NA other downstream 2100473 23538396 ~ 23538863 (+)
G23135 NA other downstream 2136669 23574592 ~ 23574995 (+)
LOC110511358 LOC106573633 other downstream 2435098 23872914 ~ 23905175 (+)
ccl4 ccl4 other downstream 3066732 24504638 ~ 24506125 (+)

Expression



Co-expression Network