Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118937457 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 74519385 ~ 74521046 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005034808.1 | True | 1040 | mRNA | 0.40 | 3 | 74519385 | 74521046 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| spring1 | cssa20h12orf49 | coding | upstream | 202804 | 74312531 ~ 74316581 (+) |
| LOC110536377 | tesc | coding | upstream | 256679 | 74251421 ~ 74262706 (+) |
| LOC110536376 | fbxo21 | coding | upstream | 268201 | 74237724 ~ 74251184 (+) |
| zgc:112294 | LOC106579817 | coding | upstream | 508142 | 74007753 ~ 74011243 (+) |
| selenoe | fep15 | coding | upstream | 513782 | 74001387 ~ 74005603 (+) |
| rfc5 | rfc5 | coding | downstream | 168409 | 74689455 ~ 74697615 (+) |
| pebp1 | pebp1 | coding | downstream | 186254 | 74707300 ~ 74711617 (+) |
| LOC118937390 | NA | coding | downstream | 201828 | 74722874 ~ 74731148 (+) |
| LOC110536385 | suds3 | coding | downstream | 356410 | 74877456 ~ 74888265 (+) |
| LOC110536386 | LOC106579824 | coding | downstream | 632484 | 75153530 ~ 75274772 (+) |
| G1016709 | NA | non-coding | upstream | 46223 | 74472680 ~ 74473162 (+) |
| G1016696 | NA | non-coding | upstream | 61476 | 74457600 ~ 74457909 (+) |
| G1016690 | NA | non-coding | upstream | 67738 | 74450993 ~ 74451647 (+) |
| G1016689 | NA | non-coding | upstream | 80266 | 74438848 ~ 74439119 (+) |
| G1016687 | NA | non-coding | upstream | 83166 | 74435763 ~ 74436219 (+) |
| G1016932 | NA | non-coding | downstream | 32541 | 74553587 ~ 74557100 (+) |
| G1017006 | NA | non-coding | downstream | 130881 | 74651927 ~ 74657323 (+) |
| G1016991 | NA | non-coding | downstream | 167374 | 74688420 ~ 74753450 (+) |
| G1017024 | NA | non-coding | downstream | 207978 | 74729024 ~ 74729857 (+) |
| G1017059 | NA | non-coding | downstream | 264812 | 74785858 ~ 74791532 (+) |
| LOC110535110 | LOC106579812 | other | upstream | 1350943 | 73155366 ~ 73254792 (+) |
| G1014834 | NA | other | upstream | 1758440 | 72760521 ~ 72760945 (+) |
| G1013922 | NA | other | upstream | 2639713 | 71879296 ~ 71879672 (+) |
| G1013617 | NA | other | upstream | 2678915 | 71838302 ~ 71840882 (+) |
| LOC110536353 | LOC106580623 | other | upstream | 2722070 | 71738585 ~ 71797315 (+) |
| G1017593 | NA | other | downstream | 779292 | 75269723 ~ 75328737 (+) |
| LOC110536406 | LOC106570821 | other | downstream | 1967462 | 76396096 ~ 76600566 (+) |
| G1018678 | NA | other | downstream | 2003092 | 76524138 ~ 76525567 (+) |
| G1019189 | ptar1 | other | downstream | 2297459 | 76818505 ~ 76821968 (+) |
| mamdc2a | LOC106570826 | other | downstream | 2368681 | 76889699 ~ 76939449 (+) |
