G1085441


Basic Information

Item Value
gene id G1085441
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 52256520 ~ 52256783 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1235024
gctgtttaacattctgatggccttgagatagatagctttgatgcacctgtactgacctcgccttctggatgatagtggggtgaacaggcagtggctcgggtggttgttgtccttgatgatctttttggccttcctgtgacattgggtgctgtaggtgtcctggagggcaggtagtttgccgccggtgatgagttgtgcagacctcactaccctctggagagccttgcggttgtggccggagcagctgccgtaccaggcggtgat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1235024 True 264 lncRNA 0.55 1 52256520 52256783

Neighbor

gene id symbol gene type direction distance location
LOC110537755 LOC106567504 coding upstream 24292 52164071 ~ 52232228 (+)
LOC110537753 LOC106567505 coding upstream 132120 52087532 ~ 52124400 (+)
LOC110537754 LOC106603847 coding upstream 191348 52026941 ~ 52065243 (+)
LOC110537746 LOC106567511 coding upstream 668629 51547730 ~ 51587891 (+)
LOC110537744 LOC106567513 coding upstream 805712 51414096 ~ 51450808 (+)
LOC110537762 LOC106567497 coding downstream 547444 52804227 ~ 52821797 (+)
LOC110537763 rnf14 coding downstream 579895 52836678 ~ 52842725 (+)
endou2 LOC106567496 coding downstream 586336 52843119 ~ 52851325 (+)
LOC110537765 LOC106567495 coding downstream 594868 52851651 ~ 52861272 (+)
LOC110537768 LOC106567493 coding downstream 748046 53004829 ~ 53132925 (+)
G1085422 NA non-coding upstream 45145 52211168 ~ 52211375 (+)
G1085339 NA non-coding upstream 183196 52072892 ~ 52073324 (+)
G1085336 NA non-coding upstream 187040 52069257 ~ 52069480 (+)
G1085332 NA non-coding upstream 200842 52054284 ~ 52055678 (+)
G1085744 NA non-coding downstream 8213 52264996 ~ 52265234 (+)
G1085768 NA non-coding downstream 24011 52280794 ~ 52280993 (+)
G1085780 NA non-coding downstream 33755 52290538 ~ 52290793 (+)
G1085787 NA non-coding downstream 41882 52298665 ~ 52298984 (+)
G1085799 NA non-coding downstream 51547 52308330 ~ 52309475 (+)
G1082266 NA other upstream 2575716 49679023 ~ 49680804 (+)
LOC110537713 LOC106567542 other upstream 2956173 49262142 ~ 49300347 (+)
G1081353 NA other upstream 3509021 48746955 ~ 48747499 (+)
G1077322 NA other upstream 6247911 46004151 ~ 46008609 (+)
nrgna NA other upstream 6336259 45900621 ~ 45920265 (+)
G1086237 LOC106567502 other downstream 392821 52649604 ~ 52657495 (+)
G1087914 NA other downstream 1852907 54109690 ~ 54148962 (+)
LOC110538908 LOC106603872 other downstream 2017523 54253719 ~ 54283905 (+)
G1091217 NA other downstream 4468824 56725607 ~ 56726003 (+)
G1091235 NA other downstream 4495635 56752418 ~ 56752947 (+)

Expression


Co-expression Network