Gene
RNA
| Item | Value |
|---|---|
| gene id | sirt4 |
| gene name | sirt4 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 54453353 ~ 54461322 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| sirt4 | Predicted to enable several functions, including NAD+ binding activity; acyltransferase activity, transferring groups other than amino-acyl groups; and zinc ion binding activity. Predicted to be involved in protein ADP-ribosylation and protein deacetylation. Predicted to be located in mitochondrial matrix. Is expressed in liver and retina. Orthologous to human SIRT4 (sirtuin 4). |
| description |
|---|
| NAD-dependent protein lipoamidase sirtuin-4, mitochondrial |
| id | name | namespace |
|---|---|---|
| GO:0070403 | NAD+ binding | molecular_function |
| id | description |
|---|---|
| K11414 | SIRT4, SIR2L4; NAD+-dependent protein deacetylase sirtuin 4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021568851.2 | True | 1365 | mRNA | 0.53 | 4 | 54453353 | 54461322 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940476 | NA | coding | upstream | 19093 | 54426385 ~ 54434260 (+) |
| LOC110494103 | LOC106565350 | coding | upstream | 69207 | 54363186 ~ 54384146 (+) |
| slc2a11a | gtr11 | coding | upstream | 91567 | 54350845 ~ 54361786 (+) |
| LOC110493214 | NA | coding | upstream | 134630 | 54317729 ~ 54318723 (+) |
| LOC110493213 | NA | coding | upstream | 136813 | 54302462 ~ 54316540 (+) |
| LOC110494110 | LOC106565356 | coding | downstream | 10637 | 54471705 ~ 54474472 (+) |
| frs3 | LOC106565358 | coding | downstream | 25738 | 54487060 ~ 54500326 (+) |
| slc6a11a | LOC106565359 | coding | downstream | 131233 | 54592555 ~ 54622676 (+) |
| eno1b | LOC106565361 | coding | downstream | 192110 | 54653432 ~ 54662827 (+) |
| rereb | NA | coding | downstream | 201807 | 54663129 ~ 54677374 (+) |
| zgc:172271 | LOC106565354 | non-coding | upstream | 8525 | 54434361 ~ 54453753 (+) |
| G1464283 | NA | non-coding | upstream | 15415 | 54437651 ~ 54437938 (+) |
| G1464280 | NA | non-coding | upstream | 18321 | 54433557 ~ 54435032 (+) |
| G1464265 | NA | non-coding | upstream | 30730 | 54422204 ~ 54422623 (+) |
| G1464609 | NA | non-coding | downstream | 104463 | 54565785 ~ 54566048 (+) |
| G1464615 | NA | non-coding | downstream | 161484 | 54622806 ~ 54624208 (+) |
| G1464616 | NA | non-coding | downstream | 163002 | 54624324 ~ 54627415 (+) |
| G1464641 | LOC106565501 | non-coding | downstream | 171772 | 54633094 ~ 54633537 (+) |
| G1464659 | rnf223 | non-coding | downstream | 229856 | 54691178 ~ 54694992 (+) |
| LOC110494100 | LOC106565348 | other | upstream | 188737 | 54256327 ~ 54264616 (+) |
| G1464092 | LOC106565344 | other | upstream | 263736 | 54147039 ~ 54189617 (+) |
| G1460249 | LOC106565103 | other | upstream | 3362464 | 51080132 ~ 51137770 (+) |
| LOC110494047 | btg2 | other | upstream | 3555909 | 50894903 ~ 50897444 (+) |
| G1459769 | NA | other | upstream | 3676281 | 50776529 ~ 50777072 (+) |
| G1466124 | NA | other | downstream | 1535326 | 55996648 ~ 55998347 (+) |
| G1466131 | NA | other | downstream | 1554255 | 56015577 ~ 56016613 (+) |
| LOC110494143 | LOC106565389 | other | downstream | 1626856 | 56088149 ~ 56127481 (+) |
| G1466224 | gem | other | downstream | 1757920 | 56219242 ~ 56220946 (+) |
