G1648092


Basic Information

Item Value
gene id G1648092
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 63775319 ~ 63775586 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1885857
aaaataaaacctTTTCATAAGTATCGACTTGTATCGACGTCATTCAAATAAAACAATTGCTCTAATTTCAAGCAGTGCATGAACAGTGATCCGACGGACTTCATAAACACAAAATATCTCCTGGTTTTTAACATGAGTGACGTGTGTACGTACTTCATATACAAGATGTAGGCTAGAGAATGGTTCTTACTGACAGTGAGGAGGAGAGCCAGAGTGACACACAGCAGCTTCATGCTGACAGTGAGGAGGAGAGCCAGAGTGACACACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1885857 True 268 lncRNA 0.41 1 63775319 63775586

Neighbor

gene id symbol gene type direction distance location
LOC110514319 rbm25 coding upstream 56309 63648369 ~ 63719010 (+)
plek2 plek2 coding upstream 209835 63557803 ~ 63565484 (+)
LOC110498294 LOC106599381 coding upstream 240616 63506786 ~ 63534703 (+)
fbln5 fbln5 coding upstream 275147 63435324 ~ 63500172 (+)
LOC110498409 LOC106592792 coding upstream 360737 63380908 ~ 63414582 (+)
ccdc177 LOC106586969 coding downstream 417923 64193509 ~ 64201734 (+)
LOC118941525 NA coding downstream 426634 64202220 ~ 64215617 (+)
LOC118941526 NA coding downstream 439700 64215286 ~ 64220569 (+)
LOC118941371 NA coding downstream 705841 64481427 ~ 64482263 (+)
LOC118941527 ERH coding downstream 764699 64540285 ~ 64552914 (+)
G1648091 NA non-coding upstream 5148 63768899 ~ 63770171 (+)
G1648090 NA non-coding upstream 6464 63768306 ~ 63768855 (+)
G1648088 NA non-coding upstream 8049 63760473 ~ 63767270 (+)
G1648082 NA non-coding upstream 49909 63725185 ~ 63725410 (+)
G1648081 NA non-coding upstream 51058 63724050 ~ 63724261 (+)
G1648093 NA non-coding downstream 64 63775650 ~ 63778881 (+)
G1648099 NA non-coding downstream 17956 63793542 ~ 63796313 (+)
G1648105 NA non-coding downstream 35428 63811014 ~ 63811425 (+)
G1648107 NA non-coding downstream 41801 63817387 ~ 63834764 (+)
G1648109 NA non-coding downstream 62205 63837791 ~ 63846412 (+)
G1647477 NA other upstream 571262 63202756 ~ 63204057 (+)
G1647411 NA other upstream 698176 63075149 ~ 63077143 (+)
G1647342 NA other upstream 756631 63016955 ~ 63018688 (+)
srsf5a LOC106611464 other upstream 1281600 62486921 ~ 62493719 (+)
G1648296 NA other downstream 352622 64128208 ~ 64129068 (+)
G1648608 NA other downstream 1204778 64980364 ~ 64980943 (+)
G1649268 NA other downstream 1686187 65461773 ~ 65463454 (+)
G1649291 NA other downstream 1768791 65544377 ~ 65545055 (+)
G1649309 NA other downstream 1802853 65578439 ~ 65582582 (+)

Expression


Co-expression Network