G2082518


Basic Information

Item Value
gene id G2082518
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 40619412 ~ 40620095 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2381309
actcagtactttgttgaagcacctttggcagcaattatagcCTGGAGCCATCTTGGTTAtgatgctacaaacttggcacacctgtatttggggagttcctcccattcttctctgcagatcctctcaaggtctgtcaggttggatggggagcgttgctgcacagctattttcaggtctcgccaGAGGATGTtcaaatcgggttcaagtccgggatctggctgggccacacccagtatgaggtcctgagcactctggagcaggttttcatcaaggatctctctgtacattgctccgtccatctttgcctcgatcccgactagtctcccagtccctgccgctgtaaaacatccccacagcatgatgctgccaccaccatgcttcaccgtagggatggtgccaggtttcctccagacgtgacgcttttctttcaggccaaagagttcaatcttggtttcatcagaccagataatcttgtttctcgcggtctgagagtcctttagatgccttttgtcaaactccaagcgggcggtcatgtgcattttaccgaggagtggcttctgtctagccattctagcataaaggcctgattggtggagtgctgcaaagatggttgtccttctggaaggttctcccatctttacagaggaactctacagctctgtcagagtgacgatttgggttcct

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2381309 True 684 lncRNA 0.50 1 40619412 40620095

Neighbor

gene id symbol gene type direction distance location
ssr3 LOC106581450 coding upstream 321860 40294831 ~ 40297552 (+)
LOC110507223 LOC106613251 coding upstream 681333 39781189 ~ 39938079 (+)
LOC110507222 LOC106581437 coding upstream 918200 39694561 ~ 39701212 (+)
LOC110508028 neus coding upstream 937852 39667989 ~ 39681560 (+)
LOC118944799 NA coding upstream 1579787 39039573 ~ 39039625 (+)
LOC110508037 LOC106581457 coding downstream 41151 40661246 ~ 40670079 (+)
LOC118944712 NA coding downstream 46922 40667017 ~ 40668632 (+)
LOC110507225 LOC106581476 coding downstream 72308 40692403 ~ 40840064 (+)
LOC110508042 LOC106613262 coding downstream 220611 40840706 ~ 40847141 (+)
LOC110507226 LOC106581479 coding downstream 237035 40857130 ~ 40878102 (+)
G2082516 NA non-coding upstream 1569 40617547 ~ 40617843 (+)
G2082500 NA non-coding upstream 23131 40596030 ~ 40596281 (+)
G2082476 NA non-coding upstream 102476 40516372 ~ 40516936 (+)
G2082475 NA non-coding upstream 106132 40513055 ~ 40513280 (+)
G2082474 NA non-coding upstream 107403 40510625 ~ 40512009 (+)
G2082517 NA non-coding downstream 2345 40622440 ~ 40623629 (+)
G2082525 NA non-coding downstream 16481 40636576 ~ 40640391 (+)
G2082509 NA non-coding downstream 51595 40671690 ~ 40672527 (+)
G2082554 NA non-coding downstream 75513 40695608 ~ 40696534 (+)
G2082604 NA non-coding downstream 185378 40805473 ~ 40805922 (+)
G2082162 NA other upstream 661661 39957215 ~ 39957751 (+)
G2081949 NA other upstream 685577 39931874 ~ 39933835 (+)
G2081884 LOC106581433 other upstream 782029 39827658 ~ 39837383 (+)
G2080014 NA other upstream 2674261 37944932 ~ 37945151 (+)
G2083005 NA other downstream 361275 40981370 ~ 40984854 (+)
G2083239 NA other downstream 592109 41212204 ~ 41212772 (+)
LOC110507232 LOC106593204 other downstream 886264 41485189 ~ 41507173 (+)
G2083851 NA other downstream 1351164 41971259 ~ 42112036 (+)

Expression


Co-expression Network