G2113542


Basic Information

Item Value
gene id G2113542
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 19044600 ~ 19044828 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2416937
caacactgaagcatccatgagagcaccagctgttctggatgactgtgtgatcaggctctccatagccgatgtgagcaagacctttaaacaggtcaacattcacaaagccgtgggccagacggattaccaggacgtgcactCAAAGCATGCatggaccaactggcaaatgtcttcactgacattttcaacctctccctaaccgagtctgtaatacctacatgtttcaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2416937 True 229 lncRNA 0.48 1 19044600 19044828

Neighbor

gene id symbol gene type direction distance location
LOC110508675 LOC106599295 coding upstream 32959 18986697 ~ 19011641 (+)
LOC110508672 NA coding upstream 179186 18849186 ~ 18865414 (+)
LOC110508669 LOC106599285 coding upstream 228014 18726254 ~ 18816586 (+)
LOC110508668 LOC106599284 coding upstream 320429 18673302 ~ 18724171 (+)
LOC110508667 LOC106599281 coding upstream 386040 18579463 ~ 18658560 (+)
LOC110508679 LOC106599305 coding downstream 160544 19205372 ~ 19209070 (+)
LOC110508681 LOC106599307 coding downstream 172653 19217481 ~ 19322102 (+)
LOC110508686 LOC106599593 coding downstream 327181 19372009 ~ 19374568 (+)
LOC110508689 LOC106599321 coding downstream 394797 19439625 ~ 19458620 (+)
LOC118944897 NA coding downstream 406030 19450858 ~ 19450910 (+)
G2113541 NA non-coding upstream 2932 19041407 ~ 19041668 (+)
G2113534 NA non-coding upstream 10773 19033563 ~ 19033827 (+)
G2113533 NA non-coding upstream 12259 19032005 ~ 19032341 (+)
G2113532 NA non-coding upstream 13938 19030458 ~ 19030662 (+)
G2113530 LOC106599299 non-coding upstream 15698 19027630 ~ 19028902 (+)
G2113549 NA non-coding downstream 5769 19050597 ~ 19050829 (+)
G2113551 NA non-coding downstream 7173 19052001 ~ 19052352 (+)
G2113552 NA non-coding downstream 7649 19052477 ~ 19052890 (+)
G2113553 NA non-coding downstream 8405 19053233 ~ 19053600 (+)
G2113571 NA non-coding downstream 22954 19067782 ~ 19069811 (+)
G2113059 NA other upstream 376104 18667115 ~ 18668496 (+)
G2112127 NA other upstream 1140676 17903198 ~ 17903924 (+)
G2111491 NA other upstream 1289019 17754937 ~ 17755581 (+)
G2111457 NA other upstream 1335971 17708256 ~ 17708629 (+)
G2111300 NA other upstream 1628368 17411144 ~ 17416232 (+)
G2113578 NA other downstream 31249 19076077 ~ 19076418 (+)
LOC110508695 LOC106599333 other downstream 578640 19623468 ~ 19636825 (+)
G2115369 NA other downstream 1396905 20441733 ~ 20442169 (+)
LOC110508722 LOC106569260 other downstream 1795742 20840508 ~ 20842019 (+)
G2116347 NA other downstream 2329667 21374495 ~ 21375078 (+)

Expression


Co-expression Network