LOC120563107 (LOC103373374)


Basic Information

Item Value
gene id LOC120563107
gene name LOC103373374
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 14683486 ~ 14684527 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807220.1
TCTTATACAGCCTGTATCCTTCTTtacagagaggaggggggggatcTTATTGGTGGAGAGCAGCGGTGGCCAGCCTATAAATACCCAGCAGCTGCACCAGCGGAGGACTCAATGGGTTCAGTTCGCCGCCAGTAGTTAACTGCCAAACCCATCAGATCATGTCTCTGTCGGGCCGTCCCAACACGGTCCGGTTGGTGTTCCTTGGGGCCGCGGGTGTCGGTAAGAGCGCGCTCATCCGCCGTTTCCTCCACGACAGCTTCGAGCACAAGTACACGCGCACAGTCGAGGAGCTTCACGTGCTGGAGTACGACCCTGCCGGGTCTGGGAAGAAGATGCGCCTGGAGATCTTGGACACCAGCGGTAGCTACTCGTTCCCGGCCATGCGGGAGCTCAGCATCCGACACAGTGACGCGTTCGCCCTGGTGTACGCAGTGGACGACCCCGGGTCCCTGGAGGAGGTGAAGCGGCTCCGCGACGAGATTCTGCAGCTACGGGGCGGCGGCAAGAAGAGCGCGCCCATCACCGTGGTCGGCAGCAAGGCAGATCTGAAAGACACCGAGGGTCGCGTGCTGCTGGCGGCTGACGTTATGGCCACCGTGGAGAACGAGTGGGACGCCGACTTCGTGGAGGCGTCCGCGCGCACCGGTGTTAACACGGTCGGAGTGTTTCGCGCGCTGCTGCAACAGGTGAACGTGCCGAACCGAGCGAGCCCTGCGGAGTGGAGGCGCAGATACACTTTGCCCAGACCAGCGGTTAAGAAACGACCACCGCTGAAGAAGAACAACAGCTGTGTCCTGTCATAAGAACATGTCCTCCGGACGACGACGGACACTGCAGCTGGACTGCTCGTGCTCAGGTGTTGCTGGTCATCACAGTGTGCGCTTACTTTGGTCTGTCCAGAGGTGCAAAGTTGGAAGGAAGGTCCATATGCACTACATGAAAATGTACTGTCTCTGAAGCTCTCGACAGTAATGATAGTCCAAATGATCTATGGGACCCCTGATAAGGAATGCACTTTATACGTGTTAAAAGATTCCCAATG

Function

NR:

description
PREDICTED: GTP-binding protein Rhes-like

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807220.1 True 1042 mRNA 0.58 1 14683486 14684527

Neighbor

gene id symbol gene type direction distance location
LOC120567678 LOC103373373,LOC104943727,LOC101061207 coding upstream 5271 14671067 ~ 14678215 (+)
LOC120567654 LOC104940897,LOC100697735,LOC102787805,LOC101469344,LOC102205566 coding upstream 73128 14601253 ~ 14610358 (+)
LOC120556593 LOC103373605,LOC102207173,LOC102788382 coding upstream 252244 14297095 ~ 14431242 (+)
LOC120562026 NA coding upstream 442091 14230240 ~ 14241395 (+)
LOC120558534 gga2,LOC107097046 coding upstream 667935 14002648 ~ 14015551 (+)
plk1 plk1 coding downstream 4472 14688999 ~ 14696163 (+)
LOC120555927 LOC107103001,LOC108240707 coding downstream 34022 14718549 ~ 14765454 (+)
LOC120562181 olfm2,LOC103372450,LOC101465338,LOC104921167 coding downstream 84448 14768975 ~ 14795933 (+)
LOC120562201 LOC101464850,LOC100698800,LOC102308559,LOC102198086 coding downstream 142210 14826737 ~ 14834284 (+)
LOC120557396 trip10 coding downstream 152027 14836554 ~ 14855255 (+)
G4457 NA non-coding upstream 16427 14600241 ~ 14667059 (+)
G4456 NA non-coding upstream 110077 14573021 ~ 14573409 (+)
G4455 NA non-coding upstream 111139 14572100 ~ 14572347 (+)
G4421 NA non-coding upstream 404626 14276507 ~ 14278860 (+)
G4410 NA non-coding upstream 434105 14248850 ~ 14249381 (+)
LOC120557406 NA non-coding downstream 183637 14868164 ~ 14872383 (+)
G4577 NA non-coding downstream 216159 14900686 ~ 14900914 (+)
G4616 LOC102799139 non-coding downstream 284652 14969179 ~ 14970733 (+)
G4620 NA non-coding downstream 310393 14994920 ~ 14995203 (+)
G4621 NA non-coding downstream 312693 14997220 ~ 14998386 (+)
G4468 NA other upstream 28434 14652010 ~ 14655052 (+)
LOC120558516 LOC107097044,LOC102212093,LOC108246147,LOC105919341 other upstream 781799 13898478 ~ 13901687 (+)
LOC120558420 LOC103367025 other upstream 1147237 13521955 ~ 13536249 (+)
LOC120568539 LOC102799075,LOC104938193,LOC103359245,LOC101486854,LOC102208768 other upstream 1411312 13183961 ~ 13272174 (+)
G4009 NA other upstream 1544670 13107298 ~ 13138816 (+)
G4481 LOC105939179,LOC103372451,LOC103156473,LOC104955445 other downstream 27162 14711689 ~ 14713213 (+)
grin2ab LOC103369342,LOC100698622,LOC102295981,LOC101467440,LOC102194499 other downstream 469030 15153557 ~ 15263452 (+)
ccdc85al LOC108236309,LOC102779450,LOC100689955,LOC101467130,LOC103358060,LOC104952295 other downstream 1395433 16079960 ~ 16105356 (+)
cep170ab LOC103358058 other downstream 1602411 16286938 ~ 16301586 (+)
zgc:175214 LOC103384011,LOC103358049,LOC102231404,LOC103131544,LOC100700402,LOC106518809,LOC104950701,LOC108236361 other downstream 1690227 16374754 ~ 16383795 (+)

Expression


Co-expression Network