G160880


Basic Information

Item Value
gene id G160880
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 36140466 ~ 36140779 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU217831
GCAGGTTCTCTCTTACACCGCTGAAGTAACGCTTGATGTCACTCTTCTGACTCATGTATCTGTGATCATAATAAGCCTTAACATATTCAGGAAAGTACAATTCGCGATAACAAGACATGTGATACTGGGTCTTTAAATCATCATCCCACAGACATCCACCTTCCAGATAACTAGGTAGAACTGAGTATCTCACGCTGCACTTCCCCTCAACCATTTCCCTGTGCTTGTTGAACAGCGTGTCCAGGTCTCTCAGGTAAGTAGAGAGGAGACGCTCCACAGGGTCGCAGGTTTGAGTCCCTCCGAGTCTCACCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU217831 True 314 lncRNA 0.47 1 36140466 36140779

Neighbor

gene id symbol gene type direction distance location
stx1b stx1b,LOC102220115,LOC107397241,LOC101067771,LOC107666328 coding upstream 51767 36043144 ~ 36088699 (+)
LOC120574792 NA coding upstream 547326 35586779 ~ 35593140 (+)
LOC120574796 NA coding upstream 583093 35540809 ~ 35557373 (+)
LOC120574795 NA coding upstream 605806 35530137 ~ 35534660 (+)
LOC120575320 NA coding upstream 708307 35431247 ~ 35432159 (+)
thoc6 thoc6 coding downstream 33610 36174389 ~ 36181428 (+)
LOC120574802 NA coding downstream 89315 36230094 ~ 36231842 (+)
LOC120575324 NA coding downstream 93025 36233804 ~ 36237301 (+)
LOC120575325 LOC106536055,LOC106675381,LOC108249197 coding downstream 99677 36240456 ~ 36243567 (+)
LOC120575326 NA coding downstream 132464 36273243 ~ 36276589 (+)
G160878 NA non-coding upstream 1140 36138974 ~ 36139326 (+)
G160873 NA non-coding upstream 54002 36082793 ~ 36086464 (+)
G160872 NA non-coding upstream 57779 36082331 ~ 36082687 (+)
G160868 NA non-coding upstream 67353 36053274 ~ 36073113 (+)
G160866 NA non-coding upstream 129201 36010847 ~ 36011265 (+)
G160881 NA non-coding downstream 459 36141238 ~ 36141590 (+)
G160883 NA non-coding downstream 14654 36155433 ~ 36155780 (+)
G160884 NA non-coding downstream 21982 36162761 ~ 36162966 (+)
G160895 NA non-coding downstream 65569 36206348 ~ 36266927 (+)
G160906 NA non-coding downstream 112142 36252921 ~ 36315304 (+)
G160851 LOC102784589,LOC104964221,LOC102077593,LOC101468505,LOC102290184,LOC102208295 other upstream 14914 36089620 ~ 36125552 (+)
LOC120575321 keratin,LOC103393440,LOC106904882 other upstream 491482 35626515 ~ 35648984 (+)
LOC120575316 NA other upstream 1084810 35045717 ~ 35055656 (+)
G160423 mvp other upstream 1173517 34962100 ~ 34966949 (+)
LOC120574901 NA other upstream 1211991 34849589 ~ 34928475 (+)
LOC120574801 NA other downstream 328827 36469606 ~ 36475472 (+)
utp18 utp18,LOC102793997,LOC101163956 other downstream 962594 37103373 ~ 37119254 (+)
LOC120575390 NA other downstream 1793283 37934062 ~ 37956436 (+)
G161714 NA other downstream 2329935 38470714 ~ 38471325 (+)
G161792 cdc27 other downstream 2629928 38770707 ~ 38772216 (+)

Expression


Co-expression Network