chek1 (chek1)


Basic Information

Item Value
gene id chek1
gene name chek1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 21144929 ~ 21152692 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777237.1
TCATGGCGGAAGTTATCGCCATCGCAGTAAACAACAACGCGCCAAATTTGTGCTATCCACTGTTGTCACTGCCTAAGACACATGAAGAAGTTTGTCGAATCTTTGTGATTATACTTAGGAGACGCTGCTGGCTAAGGAAGGCTGTGCATCATGGCTGTGCCTTTTGTGCAAGACTGGGACCTTGTTCAGACACTGGGAGAAGGAGCCTATGGAGAAGTGaagctgctggtgaacagacagacagaggaggcGGTAGCAGTGAAGGTGATCGATACCTCTCAGGCTAAAGAGTgtgctgaaaatgtaaagaaggAAGTCTGCGTCCATAAGATGCTCAACCACGCCAACATCGTTCGTTTTTTTGGCCATCGGAAGGAAGGTGTAACTATGTACCTTTTCCTGGAGTACTGTACTGGAGGAGAGCTGTTCGACCGAATCGaGCCTGATGTGGGGATGGCGGAGAAAGATGCTCATAAATTTTTCCAGCAGCTAATGGCGGCtgtgGAATACCTCCACTGTGCTGGCTTCACCCACAGAGACATAAAGCCAGAGAACATTTTGCTGGATGACAAAGATAACCTGAAGCTTACAGATTTTGGCCTGGCCACCATGTTTCGGTTCAAAGGACGAGAACGTCTTCTGAATCGACTCTGTGGGACTCTTCCTTACGTGGCTCCAGAGCTTCTCAGCCAACCAGAGTACAAAGCTCAGCCGGCAGATATCTGGGCTTGTGGGATTGTCCTCACTGCCATGCTGGCTGGAGAGTTGCCATGGGACCAGCCCAGTGAGAGCTGTCAAGAGTATTCAGACTGGCTTCAAAAGAAGACATACCTACCTCCTTGGAAGAAAATACAACCAATGCCTCTTAGTTTGTTGTCCAAATTACTGCTGCCCAGTCCAGATGCACGCATCACTATTGCAGACATACAGAAAGACCGCTGGTTTACTCAAGGTGTGAAGCAACCACCTCTGGGCTCAGGAGGAAACAAACTTCTTCGACCGGATGTGGGACTCATATCCCGGGCCAACAGTGATGACAGGATGCAGTTTTCCAGCTCTCAGCCTGATTTTGCGGCAGGTGGCTGGGAAGCCATGTTGTTAATCGGCCAAAGTGATGGCCAAGTCAGCTTCTCTCAGCCGACCAAGCCGGAGCACATGTTGCTGGGTAGTCAGCTCTTGGGCACACCGGGAGCAAGTCAGTCGCCGTGGCAGAGATTAGTGCGGAGAATGACGCGTTTCTTTACCACTGTGAATGCCGACGTCTCCTTATCGGCCCTGAAAGACGCCTGTGACGGCCTGTCACTTGGCTTCAAACTCACCTGCACCAAACAGGTGATGGTGAGCACACTGGACAAACGCAATAACAAACTCCTCTTCAAAGTCCACTTGCTAGAGATGAATCAGAGAGTGCTGCTGGACTTCAGACTGTCTAAGgGTGACGGTCTGGAGTTTAAGCGTCTCtttgtgaaaataaaacagaagcTCGGTGACATCATCAGCACTCAGAAGATTTTACCCCCCATCACATGAGAAGCCTTTACATAGAAATGCACACTGCTATGGTCATTGGAGGGAGAACCTGTATATATTTAGCTGttctactgatatttttaaatatatcctgctgttctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtccttgtttgAAGTTAAGTGTTAAAACTTGAGTTAAATCCTTACTTAAAGGAGTTATTCAGATTAGTGTTCAAAAGTCATGATTGTCAAAGTCAGGTACACATAGGGATTAggcaagtgtgtgtatgtgtgatttgTTCTGATTATGTTTTAAATGACACAGTCCAGAGTCTtgaataaattattaaaagacTAA
>XM_039777238.1
TCATGGCGGAAGTTATCGCCATCGCAGTAAACAACAACGCGCCAAATTTGTGCTATCCACTGTTGTCACTGCCTAAGACACATGAAGAAGTTTGTCGAATCTTTGTGATTATACTTAGGAGACGCTGCTGGCTAAGGAAGGCTGTGCATCCTGACAAGTTTCTGTCTTTAGCATGGCTGTGCCTTTTGTGCAAGACTGGGACCTTGTTCAGACACTGGGAGAAGGAGCCTATGGAGAAGTGaagctgctggtgaacagacagacagaggaggcGGTAGCAGTGAAGGTGATCGATACCTCTCAGGCTAAAGAGTgtgctgaaaatgtaaagaaggAAGTCTGCGTCCATAAGATGCTCAACCACGCCAACATCGTTCGTTTTTTTGGCCATCGGAAGGAAGGTGTAACTATGTACCTTTTCCTGGAGTACTGTACTGGAGGAGAGCTGTTCGACCGAATCGaGCCTGATGTGGGGATGGCGGAGAAAGATGCTCATAAATTTTTCCAGCAGCTAATGGCGGCtgtgGAATACCTCCACTGTGCTGGCTTCACCCACAGAGACATAAAGCCAGAGAACATTTTGCTGGATGACAAAGATAACCTGAAGCTTACAGATTTTGGCCTGGCCACCATGTTTCGGTTCAAAGGACGAGAACGTCTTCTGAATCGACTCTGTGGGACTCTTCCTTACGTGGCTCCAGAGCTTCTCAGCCAACCAGAGTACAAAGCTCAGCCGGCAGATATCTGGGCTTGTGGGATTGTCCTCACTGCCATGCTGGCTGGAGAGTTGCCATGGGACCAGCCCAGTGAGAGCTGTCAAGAGTATTCAGACTGGCTTCAAAAGAAGACATACCTACCTCCTTGGAAGAAAATACAACCAATGCCTCTTAGTTTGTTGTCCAAATTACTGCTGCCCAGTCCAGATGCACGCATCACTATTGCAGACATACAGAAAGACCGCTGGTTTACTCAAGGTGTGAAGCAACCACCTCTGGGCTCAGGAGGAAACAAACTTCTTCGACCGGATGTGGGACTCATATCCCGGGCCAACAGTGATGACAGGATGCAGTTTTCCAGCTCTCAGCCTGATTTTGCGGCAGGTGGCTGGGAAGCCATGTTGTTAATCGGCCAAAGTGATGGCCAAGTCAGCTTCTCTCAGCCGACCAAGCCGGAGCACATGTTGCTGGGTAGTCAGCTCTTGGGCACACCGGGAGCAAGTCAGTCGCCGTGGCAGAGATTAGTGCGGAGAATGACGCGTTTCTTTACCACTGTGAATGCCGACGTCTCCTTATCGGCCCTGAAAGACGCCTGTGACGGCCTGTCACTTGGCTTCAAACTCACCTGCACCAAACAGGTGATGGTGAGCACACTGGACAAACGCAATAACAAACTCCTCTTCAAAGTCCACTTGCTAGAGATGAATCAGAGAGTGCTGCTGGACTTCAGACTGTCTAAGgGTGACGGTCTGGAGTTTAAGCGTCTCtttgtgaaaataaaacagaagcTCGGTGACATCATCAGCACTCAGAAGATTTTACCCCCCATCACATGAGAAGCCTTTACATAGAAATGCACACTGCTATGGTCATTGGAGGGAGAACCTGTATATATTTAGCTGttctactgatatttttaaatatatcctgctgttctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtccttgtttgAAGTTAAGTGTTAAAACTTGAGTTAAATCCTTACTTAAAGGAGTTATTCAGATTAGTGTTCAAAAGTCATGATTGTCAAAGTCAGGTACACATAGGGATTAggcaagtgtgtgtatgtgtgatttgTTCTGATTATGTTTTAAATGACACAGTCCAGAGTCTtgaataaattattaaaagacTAA

Function

symbol description
chek1 Predicted to enable protein serine/threonine kinase activity. Acts upstream of or within intrinsic apoptotic signaling pathway in response to DNA damage; mitotic G2 DNA damage checkpoint signaling; and protein phosphorylation. Predicted to be active in nucleus. Is expressed in forebrain; hindbrain; immature eye; and midbrain. Human ortholog(s) of this gene implicated in pancreatic cancer. Orthologous to human CHEK1 (checkpoint kinase 1).

NR:

description
serine/threonine-protein kinase Chk1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K02216 CHEK1; serine/threonine-protein kinase CHEK1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777237.1 False 1955 mRNA 0.47 14 21144929 21152692
XM_039777238.1 True 1977 mRNA 0.47 14 21144929 21152692

Neighbor

gene id symbol gene type direction distance location
bud13 LOC106633751 coding downstream 64828 21075568 ~ 21080101 (-)
arhgap42a LOC103355103 coding downstream 77712 21048863 ~ 21067217 (-)
LOC120544403 LOC104934526,LOC103355106 coding downstream 129779 21004634 ~ 21015150 (-)
birc2 birc2 coding downstream 140919 20992197 ~ 21004010 (-)
slc47a1 NA coding downstream 234865 20897043 ~ 20910064 (-)
alg9 alg9,LOC102790096 coding upstream 27553 21180245 ~ 21188473 (-)
fdxacb1 fdxacb1 coding upstream 35887 21188579 ~ 21191988 (-)
bicdl2 LOC103355093,LOC104964650 coding upstream 43841 21196533 ~ 21202268 (-)
LOC120544720 NA coding upstream 52012 21204704 ~ 21206812 (-)
LOC120544786 NA coding upstream 104505 21257197 ~ 21257288 (-)
G167179 NA non-coding downstream 157011 20987212 ~ 20987918 (-)
G167176 NA non-coding downstream 161992 20981723 ~ 20982937 (-)
G167152 NA non-coding downstream 210945 20931407 ~ 20933984 (-)
G167148 cct8 non-coding downstream 216777 20926623 ~ 20928152 (-)
G167083 NA non-coding downstream 340962 20801207 ~ 20803967 (-)
G167316 NA non-coding upstream 94193 21246885 ~ 21248228 (-)
G167367 LOC104936496,LOC104961720,LOC108428037,LOC102785324 non-coding upstream 278148 21430840 ~ 21435916 (-)
G167371 LOC103141239,LOC106952034,LOC102230208,LOC103475454,LOC106921555,LOC104936496,LOC105919852,LOC103356782 non-coding upstream 293476 21446168 ~ 21447176 (-)
G167373 NA non-coding upstream 296140 21448832 ~ 21449560 (-)
G167420 NA non-coding upstream 435186 21587878 ~ 21608765 (-)
snrnp35 snrnp35,LOC102792111 other downstream 54482 21073053 ~ 21090447 (-)
G167129 aldoc other downstream 192395 20944001 ~ 20952534 (-)
G166843 NA other downstream 1344996 19746178 ~ 19799933 (-)
G166840 sod1 other downstream 1425206 19714639 ~ 19719723 (-)
haus1 haus1 other downstream 1468739 19672078 ~ 19676190 (-)
G167416 NA other upstream 421526 21574218 ~ 21584182 (-)
brd8a brd8,LOC104924599 other upstream 569626 21722318 ~ 21741824 (-)
LOC120543962 LOC103368266 other upstream 692005 21844697 ~ 21863744 (-)
G167589 prdx4,LOC101470355 other upstream 844267 21996959 ~ 21998648 (-)
zbtb20 zbtb20 other upstream 1065368 22218060 ~ 22250378 (-)

Expression


Co-expression Network