LOC120545327


Basic Information

Item Value
gene id LOC120545327
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 37104207 ~ 37113771 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU244695
AGTTATGTGGAGGATTCTCCTGATGGTCAGTGAATGTGGCGGTGTAACTGTTgctgtaattgtgtgttttagggagttatgtggaggattttccTGATGGTCAGTCTGCTCTGCTGGAGCGCTGACGGACAAAGAGTGACCTGCAGAGACCACAACAACGGAGAAGTGGACTGGTACATCATCTACAAGGCACCCAAACTGAAAGACATCAAAACTGACGGtttagaatatatttacattgattcaaaagggaagaagaaggagaCGTCTAAAGATCACAATAAGCTCATCAACGCTGCTGACGGTGTCCTGGCAAACACCCTGCGACCCATTTTAAAACCAATCAAATCAATGACAGACAACTTTGGATTCATCACCTACAACGATCAACCTCCAGGATGTAATGCTTTTGCTAC
>XM_039779579.1
TGTGGCGGTGTAACTGTTgctgtaattgtgtgttttagGGAGTTATGTGGAGGATTCTCCTGATGGTCAGTGAATGTGGCGGTGTAACTGTTgctgtaattgtgtgttttagggagttatgtggaggattttccTGATGGTCAGTCTGCTCTGCTGGAGCGCTGACGGACAAAGAGTGACCTGCAGAGACCACAACAACGGAGAAGTGGACTGGTACATCATCTACAAGGCACCCAAACTGAAAGACATCAAAACTGACGGtttagaatatatttacattgattcaaaagggaagaagaaggagaCGTCTAAAGATCACAATAAGCTCATCAACGCTGCTGACGGTGTCCTGGCAAACACCCTGCGACCCATTTTAAAACCAATCAAATCAATGACAGACAACTTTGGATTCATCACCTACAACGATCAACCTCCAGGATGTAATGCTTTTGCTACATTTGGCCACAGTAAAGGAGTTGTGATGATGGATAAAACCACCACAGGAGTCTGGCTCTCACACAGCACACCACAGTTCCCTTTCAAAAGAGATCAAAATAAGTTCTACCCAACCAGCGGAGCAAAACATGCTCAGACGTTTATCTGTGTAACATTCAACTACAAGGAGTTCAAAGACATAGGTCAACACCTGCTGGACATCGCAGCTTTCCCGTTTGATCATCATATTCCAACTGGCTTCCATGAACAGCTTATAAAGGTTACAGAGAAAGACTTGAAGGAAAATCCACCAGGAGGGAAAATCTCGGACCTGACATCACCAGGACAACAAGCATTTGTTACCTTTGCTAAAAAACTGTATGAAGGTGAAATTTTTACTGTGGAAccacggttcgATGGAGATCTTTACCTCACTATTGCAGAGCATTACCAGACTAATGTGAGAGTCCAGACCTGGGGCTGCCAGGATGGCCGTGAACGTTCCTACTGCGGCAAGAATCGTAAAGTGATCAATATTGAATCTGTAAAACCTAATCTGGGTAACAGGGAGGTTAAGTGGAAGGCTAGTAATGATCATTCCAAGTGGTGTGTAGCTgaagataataataatgatttgaTCTGTATCGCTGATGTAAACAGAGCAGTCACCCAATACAAAAGGCCGGGGGGGGCACTGTGCTTTAGACATAAAGAGGCAAGTAAACTATTTGAAGATGTTATTGATAAAACTGAGCTTTGCCCAAGTCCTACCACCACCAGTGCTGGCTCAAAGCGTACCCACTCGTCCTCTAGCACTTCTGACACTAGCGCTGCCTGTGACAGTGACTCTGATTAATGATCGATAAGATAAATACGCCTCTCCTCGCCGTCTAcaagtcctgttttttttttctggtgtttGGGTCTGAGTGTGCTTCGGTTTTTCACtttcaaattattattaattgacaTATATTTCTGAATCCATAGTTAAATACAAAAGAGGGCTGACAGAAATATAAATTACTTCTAAAAATGTATAATCCCTACCAATTGTCACTGTTGATAGATAATAAGTAGTTTGAACGTTTCTAACTTAAGTCAGAGTTTGTGTTTAACATTTTAAGGGTTGCCCTAGCTGAAATAGGTCTAACGATGTCATGAGTTACAACTTCAATCTTACAGCTCGCCCTCAGTAGATGTAAAGTCCTCCGTATAATAGCGGTTGTCATGGCGCGTGGTTTTGTCAGGTaaagaggaagatgaggaggagcgAGCGGCTGTTTTCTGTTCTCCGGATAGATTCCACTCATAAGATATCTTTAATAATTGTGATTAATACTCTGGCTTCTGTTTCCAGGAGCTGAGACACGTTACTGTCCTGCTGGCAGCAGACTCCTTAGATAACCTTCTGATTTACAGCTCCTCATTTACAACAGTTAGCCAGTGTAGCTATCATTAGGTTTGTTATGGGGGggggcctatgttcccacatttcgaAGATTTTTCCTAAAAtgaggccctatgttagggttacattccatctgtagtccattgctactggat

Function

GO:

id name namespace
GO:0006259 DNA metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244695 False 416 TUCP 0.44 3 37104247 37109021
XM_039779579.1 True 2001 mRNA 0.43 7 37104207 37113771

Neighbor

gene id symbol gene type direction distance location
LOC120545293 NA coding upstream 13687 37085345 ~ 37090520 (+)
capslb capsl coding upstream 646675 36384013 ~ 36457532 (+)
LOC120545268 NA coding upstream 722455 36363002 ~ 36381752 (+)
LOC120545287 NA coding upstream 838532 36223794 ~ 36265675 (+)
LOC120545323 NA coding upstream 867295 36228300 ~ 36236912 (+)
LOC120545292 NA coding downstream 11528 37125299 ~ 37134890 (+)
LOC120545871 NA coding downstream 23605 37137376 ~ 37162177 (+)
ppp1r3b NA coding downstream 76365 37190136 ~ 37202665 (+)
mfhas1 mfhas1,LOC102794566 coding downstream 92002 37205773 ~ 37253606 (+)
rpl17 rpl17 coding downstream 147977 37261748 ~ 37268763 (+)
G180564 NA non-coding upstream 29557 37048450 ~ 37074650 (+)
G180570 NA non-coding upstream 37480 37064714 ~ 37066727 (+)
G180566 NA non-coding upstream 45879 37055622 ~ 37058328 (+)
G180491 NA non-coding upstream 107368 36680143 ~ 36996839 (+)
G180546 NA non-coding upstream 176024 36926114 ~ 36928183 (+)
G180584 NA non-coding downstream 7814 37121585 ~ 37239211 (+)
G180593 NA non-coding downstream 103682 37217453 ~ 37217726 (+)
G180594 NA non-coding downstream 106514 37220285 ~ 37221131 (+)
G180596 NA non-coding downstream 124932 37238703 ~ 37243092 (+)
G180597 NA non-coding downstream 127777 37241548 ~ 37243717 (+)
LOC120545105 ptbp3,LOC106536240 other upstream 776811 36320335 ~ 36327396 (+)
G180414 NA other upstream 926285 36176963 ~ 36177922 (+)
G180410 hsdl2 other upstream 927836 36123080 ~ 36176371 (+)
LOC120545305 NA other upstream 1043684 36048606 ~ 36060523 (+)
G180366 NA other upstream 1061780 35850922 ~ 36042427 (+)

Expression


Co-expression Network