LOC120545309


Basic Information

Item Value
gene id LOC120545309
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 35280173 ~ 35331959 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779555.1
AGCTGCTGTACCTGCATCAACTAACAGtttgatttaaagtCAGCTTCTTCATCACTCTGAAGAGGAGATCTCAACACTTCAGGAGGACCAGGAGACCTGGAGATGGCTTCAAcaccaagaagaagaagaagaatgagcATAGTCATACCTCCTGATCTGTCTGAATTAATGGACCAAGTCAAAGAACTTGCAGTCCCATTCGTCAGAGAGTTTGACAGCAGTGAACCAAAGATGCAAGAGATTGAAGGAGAGTTTAGGAACATCGCTGAAGTCAGAAAGATGCAGAAGAGAACAGATAAAAATGCATTAGCAATAGCAGGCGCTGTTATTGGAGGATTAGGAATACGAGCAGGAGTAGGAATAGGAGCAGCAGTAGGAATAGGACTCCTGGTCTTTGCAGCTCCGTTCACTGAGGGGGCGAGTTTAGCAGCAGTAGCACCGTTAGCAGTAGCAGCAGGAGCTGTAGCAGGAGGAGCTGTGGTTGCTGGTgtaaattcaataaaaacaatgaaagcGAACAGAAGTataaagaaagtgaaaaagctGGCGAAAGACTTTAAGGAGATCACTGAACCGCTGAAGATTGACCTGGAAGAAATAAAGAGGACGTGTGAGAAGTTGGAGCAAAGATCAGCTGGACTTCAGGCTGGAATCACTCTGACAGACATGGAGGACTTTCAGAGGATTCTGAGACGAGTTTCTGAACTGGCAGAAAGGAGTGGAGAAGTTTTGTCTGCAGCTGTAAAAGTGATGAGTTCCATAGATGTGAAAGTCTTCAGAGTCACAGCGACCCCTGAAGAGGATAAAAAGTTAACGGACTCCATCATCCAGTCAGCTGATCGCTGTCAGGAGGTCGTTGTCAAGTTTGATCAGATGAAGAAAGAACTCAAAGACTTCactgaaaaataaagatagaagcAGCAGGAGAAGAGAAAGACTGGTTCACACTGAAACTGCTGACTACCTGTTAGTGTTTGATCATTATCTAACATACTGGACTCATAGTAACTGAATCAGAT
>XM_039779556.1
GAAGACTGAGAGATCAGAGCTGCTGGACCTGCATCAACAGCAGTACACTGCTGCTGTCTGATTGGTTGCTCTGATCATGTGATTTCTGATGCTGATCAACAGACATTAAGACTGAGCTGCTGTACCTGCATCACCTCACACACAGtttgatttaaagtCAGCTTCTTCATCACTCTGAAGAGGAGATCTCAACACTTCAGGAGGACCAGGAGACCTGGAGATGGCTTCAAcaccaagaagaagaagaagaatgagcATAGTCATACCTCCTGATCTGTCTGAATTAATGGACCAAGTCAAAGAACTTGCAGTCCCATTCGTCAGAGAGTTTGACAGCAGTGAACCAAAGATGCAAGAGATTGAAGGAGAGTTTAGGAACATCGCTGAAGTCAGAAAGATGCAGAAGAGAACAGATAAAAATGCATTAGCAATAGCAGGCGCTGTTATTGGAGGATTAGGAATACGAGCAGGAGTAGGAATAGGAGCAGCAGTAGGAATAGGACTCCTGGTCTTTGCAGCTCCGTTCACTGAGGGGGCGAGTTTAGCAGCAGTAGCACCGTTAGCAGTAGCAGCAGGAGCTGTAGCAGGAGGAGCTGTGGTTGCTGGTgtaaattcaataaaaacaatgaaagcGAACAGAAGTataaagaaagtgaaaaagctGGCGAAAGACTTTAAGGAGATCACTGAACCGCTGAAGATTGACCTGGAAGAAATAAAGAGGACGTGTGAGAAGTTGGAGCAAAGATCAGCTGGACTTCAGGCTGGAATCACTCTGACAGACATGGAGGACTTTCAGAGGATTCTGAGACGAGTTTCTGAACTGGCAGAAAGGAGTGGAGAAGTTTTGTCTGCAGCTGTAAAAGTGATGAGTTCCATAGATGTGAAAGTCTTCAGAGTCACAGCGACCCCTGAAGAGGATAAAAAGTTAACGGACTCCATCATCCAGTCAGCTGATCGCTGTCAGGAGGTCGTTGTCAAGTTTGATCAGATGAAGAAAGAACTCAAAGACTTCactgaaaaataaagatagaagcAGCAGGAGAAGAGAAAGACTGGTTCACACTGAAACTGCTGACTACCTGTTAGTGTTTGATCATTATCTAACATACTGGACTCATAGTAACTGAATCAGAT

Function

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779555.1 False 1019 mRNA 0.44 2 35280173 35331959
XM_039779556.1 True 1137 mRNA 0.44 3 35328060 35331959

Neighbor

gene id symbol gene type direction distance location
LOC120545272 NA coding upstream 48025 35205081 ~ 35232148 (+)
LOC120545273 NA coding upstream 136688 35134471 ~ 35143485 (+)
LOC120545265 man2a1 coding upstream 256391 34986670 ~ 35023782 (+)
si:ch211-202f5.2 NA coding upstream 428569 34850601 ~ 34851604 (+)
fktn fktn coding upstream 482995 34777854 ~ 34797178 (+)
LOC120545316 NA coding downstream 156858 35488817 ~ 35493227 (+)
LOC120545281 NA coding downstream 237688 35569647 ~ 35578604 (+)
LOC120545314 NA coding downstream 313595 35645554 ~ 35659827 (+)
LOC120545287 NA coding downstream 891835 36223794 ~ 36265675 (+)
LOC120545323 NA coding downstream 896341 36228300 ~ 36236912 (+)
G180285 NA non-coding upstream 214155 35039188 ~ 35066018 (+)
LOC120545338 NA non-coding upstream 230042 35048840 ~ 35050131 (+)
G180266 NA non-coding upstream 238482 35027747 ~ 35041691 (+)
G180280 NA non-coding upstream 258098 34991127 ~ 35022075 (+)
G180278 NA non-coding upstream 292504 34987150 ~ 34987669 (+)
G180325 NA non-coding downstream 29073 35361032 ~ 35361613 (+)
G180259 NA non-coding downstream 48223 35380182 ~ 35384384 (+)
LOC120545328 NA non-coding downstream 88557 35420516 ~ 35902434 (+)
G180297 NA non-coding downstream 216818 35548777 ~ 36054110 (+)
G180340 NA non-coding downstream 226709 35558668 ~ 35559410 (+)
G180268 NA other upstream 324207 34953064 ~ 34955966 (+)
G180216 NA other upstream 465263 34807258 ~ 34814910 (+)
G180213 fktn other upstream 476423 34716286 ~ 34803750 (+)
G180201 NA other upstream 714221 34564880 ~ 34565952 (+)
G180199 NA other upstream 719788 34557582 ~ 34560385 (+)
LOC120545301 NA other downstream 24439 35356398 ~ 35891299 (+)
G180366 NA other downstream 518963 35850922 ~ 36042427 (+)
G180382 NA other downstream 637807 35969766 ~ 35973061 (+)
LOC120545305 NA other downstream 716647 36048606 ~ 36060523 (+)
G180410 hsdl2 other downstream 791121 36123080 ~ 36176371 (+)

Expression


Co-expression Network