G186130


Basic Information

Item Value
gene id G186130
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 21168509 ~ 21172624 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU252065
tttattgaaaaacataacattttcttgagggaggacccctTAACCCCCCACCAAATACATGCACCTAAATATTtcacaaacctagggaaaacactgtaACCCTCAGACATATTTAAAGTTAATTCAGATTCAGTGAATCATACTGCTGTAAATGTGAAATCACAGTCACCACGGCTGTTGTTAATAGGACAGCCATGGACGTAAACTGTAAGCTAAGTCAGTGAAGAATCAGACagttcactttatttttctgatGAACCATGTCTTGAACTAATCTGAAGGTGGACAATTTGCTGAAAAAAATCTGCGAGTGAATGCATTGTGTAGTACGAGATAACATTAGGAAAGTCCGTTCTGGCTCAAATGTTCAGTATAGGGTTGAATCATGCGGTCAGCTCTGTTCTACACTAGAGGCTACTGAAGCTCTTTAGTGGTTGTTGTGTAGCCTAGTTTGTCGCCAGaccgtaaaaaaacaaacacattatatTCTCCCACAGAGAACTCAGTTCGGATGTCTCAGTTGCATGTTTAACATTTGCAAAAGTTTCCGATATTTGTTCTCGGTCTTTTTATGCTGCAACTTTGTTTGGCTGTAAGTTAGATCCATGTTTCTGATGATTTATATTGTCAAAACATTGCAAACCGTGTTCATCTAAAGACAAACTCTTAAACTGCCCTAAGTCCAAGAAGCAAGACTTCTTTGAAACAGTTGAGTATCATTTCTGCGTGACGGTGAATGAGTTCTGGTCCATTAACTCGCCAACTCTCTCCTGGAGGGTCTGAACCACCTCTGCCAGGATGAAGAGGTGTGTGTCGTCAAGGTCCTTGAGGATGAACTTCTTTCCCAGGGCCATTTTTTCATCCAAGTAGAGGAGGAACTGTTTCATGGCAGGATCACTGGTCCAGTGAGCAGAGGGGAGCAAGGGGAAACAACTTTAAGTTCTGCACAAATATGTTAAGATGATCTACGTCTACCTCGATGAGCTCCCCGATGCCGAGATCTGAAACCAAACCAGAGCAGGCTCAAGGAAGTTCTCATTCAGGTTGCGCAGTGCTGTCCATGCATATCTGGGTCCTCTGAGGCATCCAGCAGCATTTTCTTCACAAGCAATCCTGATGGAAAAATCAAACACAAGAGGATACAAACAGACAGTGAGCACAACTTTTTTGAGGTATGAAATAAGACTGAGccatttgtttttcatgttgCGTTCAAGGGATTGGAGTACAAATCTAACATGCTTGTGGAAAGAAAGTTCTGACAGAATACCTCCCATGCTGTGGGCTACCCAGACCACAGGCCTCTCTCCAACTCCTGCCAGCTTTAACTTCTTTAGCAGCTCTCGACTTCTGTAGGCCAAGGACTTCCTGAAGGGACCAAAGCAAAGAATGAATCAACAGTTCATTTATTGAGAGTATGTTGGAATTGTGCATAATGAATACTGCAACATTTgagataataaaacatttaacttGACTAAGA

Function

GO: NA

KEGG:

id description
ko03030 DNA replication
ko03420 Nucleotide excision repair
ko03430 Mismatch repair
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU252065 True 1483 lncRNA 0.42 4 21168509 21172624

Neighbor

gene id symbol gene type direction distance location
zbtb2b zbtb2,LOC104964770,LOC102290046 coding downstream 179147 20981795 ~ 20989362 (-)
LOC120546146 LOC103355020,LOC104928884,LOC104962358,LOC101075501 coding downstream 278773 20886589 ~ 20889736 (-)
LOC120547337 NA coding downstream 283005 20883137 ~ 20885504 (-)
trnal-uaa_20 NA coding downstream 290563 20877864 ~ 20877946 (-)
utrn utrn coding downstream 293765 20686217 ~ 20874744 (-)
tmem181 tmem181,LOC102777939 coding upstream 6286 21178910 ~ 21186119 (-)
tulp4a tulp4,LOC102779174 coding upstream 14162 21186786 ~ 21223267 (-)
msgn1 msgn1 coding upstream 64530 21237154 ~ 21237826 (-)
LOC120546554 NA coding upstream 66562 21239186 ~ 21247602 (-)
cep57l1 cep57l1 coding upstream 96072 21268696 ~ 21273768 (-)
LOC120546177 NA non-coding downstream 2520 21159371 ~ 21165989 (-)
G186148 myct1,LOC103355010 non-coding downstream 5615 21161237 ~ 21162894 (-)
LOC120546930 NA non-coding downstream 485477 20672237 ~ 20683032 (-)
G186018 NA non-coding downstream 539650 20628660 ~ 20628859 (-)
G186004 NA non-coding downstream 606176 20536106 ~ 20562333 (-)
G186228 NA non-coding upstream 103295 21275919 ~ 21325593 (-)
G186271 NA non-coding upstream 265112 21437736 ~ 21469376 (-)
G186280 ostm1,LOC102784722 non-coding upstream 330917 21503541 ~ 21506804 (-)
G186321 NA non-coding upstream 530878 21703502 ~ 21703721 (-)
G186342 NA non-coding upstream 550999 21723623 ~ 21843619 (-)
syne1a syne1,LOC102291171,LOC103355013,LOC102194633 other downstream 13697 21012392 ~ 21154812 (-)
G186006 NA other downstream 601030 20562437 ~ 20567479 (-)
ccdc167 ccdc167 other downstream 1318705 19846958 ~ 19849804 (-)
LOC120546212 fam150b,LOC104941953,LOC100704438 other downstream 1515582 19648527 ~ 19652927 (-)
LOC120546238 efr3b,LOC101073163 other downstream 1814193 19334055 ~ 19354316 (-)
LOC120547346 NA other upstream 217 21172841 ~ 21173006 (-)
LOC120547366 NA other upstream 2714 21175338 ~ 21175528 (-)
si:ch211-51e12.7 NA other upstream 54342 21226966 ~ 21236529 (-)
armc2 armc2 other upstream 153632 21326256 ~ 21348649 (-)
prdm1c prdm1,LOC104943060 other upstream 1062183 22234807 ~ 22244092 (-)

Expression


Co-expression Network