G43241 (LOC104958239,LOC105940397,LOC103464819,LOC108244949,LOC103150142)


Basic Information

Item Value
gene id G43241
gene name LOC104958239,LOC105940397,LOC103464819,LOC108244949,LOC103150142
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 33022345 ~ 33042122 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU58081
ATTACATCAGTGGTTAGGAAGGACACATACCAAGTACATCATTTTATGAGATGGATCACAACATTCATGTTGTAACTAGATGAAAAGACTAATAGCTTTAACACAATTAGCCTATATAAAGCtagtcgtgacacagcttatgcagGACCGCATGTTGTTAGGTGAAGCCAagtactgaaataaatccagggcatgttgatctttaTTTGTAGTACAGACCTCAGGTCACTGatacttgggtggagtgatttgCTCACAGCAAATGAGAAGCCCCATGGTGAGGAGCAGAGTGCAACAACTGCTTTTTCCAGGTGTTGCTCTAATCACTCCACCCAaatagcagtgcttcgccttctgagaatatagttccgagTATGTatagttagaagatggctgtctcttgtgactttatttgtccacactgactatacaaatcagaaagtgtaaataggaaaatgttggcctTATTGTCACtaagcagtaggctagttggagtcTGTTACcttcaggatctgtgctaagctaggctagcagtgggtgcTTCAGAATTACAGCACAGAGATTAGGATATGTATGGACTCCTTTAACtatgggggatacggtgaataagctaaagtcccaataagtcagcgtgttcctttaacacgCATGTTGTAACTGGGTGAAAAGACTAACAGATTTTACACAATGATTTAAAGATAGTGGAACAAAGTAGTTAGATCTTGTGTACAGACAAACTGCACTTGACATTTCAAAGTGTTGCTTCCACTTTATTACTAAAGTTAACCTAAGAACACCATGGACAAAAGGAAACCGTGtcaatcatttaatttatttagctAGAAAGGAAATTCATACTAAAAAGCCCAGTTTTCAAAATACAGCTGTGATTGTGTATGAAAGTGGAACAGCATTGTGCTTCTTTAAAAAAGGcctttatctaaaaaaaaaaaaatataaaccaAAACCTGGGGAGTCTAGCTGATATCCATGCTCTCTGCTGACCCTAAgccacccccctcccctccctggaCGCTCTGGTAGATTGACGCCATGTCAGCGTTGGTTCTGATCTGGTTGGCGAAGTCGGCCATGCTGGGGCTCCTCTCCACCTCGGGCACGGCCAGCAGGGCGGCGACAGCGCGCATGGCCGAGCGCCGCAGCTCCTCAAACTCCTGCTTCACAGAACCGGCCTTACCTTGGTAGTGCAGGTAACTTTAAGAGGCTCCATCAGTCTGTCCAGTCTTTGGAGAACAGCTGCCGGACACAGACGCCAGTCGAGCCAACGTCAGCATGTAGCCCAAGTTACTGGTTTTGGACAGCACCAGTGCCTGTAGGAAGTCCAGTATGGCTGCCAGCGCTGCACCCTACTGCAGTGGAGAGTGGACGAGTCTGGGGACTACCGGCAGCACGGAGGAGCTGATCTTAGCCAGAGAGGAGGGACACCATTTGGCCATGCAGGTCAGCAAGGTGACGGATAACGTGACAACCCGTGCTGTCTGGCTGTTCACCGGTCTCTCTGACTCAGCAGGAGCTAAGTCAGAGTAACCTGGAACACCTGAGGGTGCCCAGGTTATTTAAGCCTAGCTGCAGTGCAGCCaagcaataaaaacatattGGTGGCTGACTTGACTGAGGAAACTTAATTTTTCTACACAAGACCTGGATttgggagaggagaagagaactGGCACTATGAAAAGTGAAGCATGAACCAGCAGAGCAGCCAATTTCCAAATGATGCTGGAATACAGAGAAAAGATGCTGAAGGAGCCATCCTTGTGTCTAACTTTAATTCAGTGGATCTAGCTGGATCTGAGCGAGCAAGTCAAACAGGGGCTGAAGGTGCACGGTTTAAAGAAGGTTGCAATAACACTACTACTCTTACATAGACAGTAGGCTAACGCATATTTCTACAGAACTCCTCGAGTGGGAACGCTAAAACACTCATCATCTGCACCATCACTCCTGCTTCTCTTCCAGGATCATTTGGAAATTGGTGTTTGAATGGCCACACTGCTGGTTCATACTACTATGTAGAAGAAGTACCAGTTTCCTCAGCCACAAAGACGTTCTCCTGCTCAGCTGCACTGCAGCCAGGCTTAAATATCCTGGGCACCCTCAGGTGTTCC
>TU58083
ATTACATCAGTGGTTAGGAAGGACACATACCAAGTACATCATTTTATGAGATGGATCACAACATTCATGTTGTAACTAGATGAAAAGACTAATAGCTTTAACACAATTAGCCTATATAAAGCtagtcgtgacacagcttatgcagGACCGCATGTTGTTAGGTGAAGCCAagtactgaaataaatccagggcatgttgatctttaTTTGTAGTACAGACCTCAGGTCACTGatacttgggtggagtgatttgCTCACAGCAAATGAGAAGCCCCATGGTGAGGAGCAGAGTGCAACAACTGCTTTTTCCAGGTGTTGCTCTAATCACTCCACCCAaatagcagtgcttcgccttctgagaatatagttccgagTATGTatagttagaagatggctgtctcttgtgactttatttgtccacactgactatacaaatcagaaagtgtaaataggaaaatgttggcctTATTGTCACtaagcagtaggctagttggagtcTGTTACcttcaggatctgtgctaagctaggctagcagtgggtgcTTCAGAATTACAGCACAGAGATTAGGATATGTATGGACTCCTTTAACtatgggggatacggtgaataagctaaagtcccaataagtcagcgtgttcctttaacacgCATGTTGTAACTGGGTGAAAAGACTAACAGATTTTACACAATGATTTAAAGATAGTGGAACAAAGTAGTTAGATCTTGTGTACAGACAAACTGCACTTGACATTTCAAAGTGTTGCTTCCACTTTATTACTAAAGTTAACCTAAGAACACCATGGACAAAAGGAAACCGTGtcaatcatttaatttatttagctAGAAAGGAAATTCATACTAAAAAGCCCAGTTTTCAAAATACAGCTGTGATTGTGTATGAAAGTGGAACAGCATTGTGCTTCTTTAAAAAAGGcctttatctaaaaaaaaaaaaatataaaccaAAACCTGGGGAGTCTAGCTGATATCCATGCTCTCTGCTGACCCTAAgccacccccctcccctccctggaCGCTCTGGTAGATTGACGCCATGTCAGCGTTGGTTCTGATCTGGTTGGCGAAGTCGGCCATGCTGGGGAGTCTAGCTGATATCCATGCTCTCTGCTGACCCTAAgccacccccctcccctccctggaCGCTCTGGTAGATTGACGCCATGTCAGCGTTGGTTCTGATCTGGTTGGCGAAGTCGGCCATGCTGGGGCTCCTCTCCACCTCGGGCACGGCCAGCAGCGCGGCGACAGCGCGCATGGCCGAGCGCCGCAGCTCCTCCTGCTTCTCAAACTCCTGCTTCACAGAACCGGCCTTCACCTGCAGGAAGGGGAGATTGAGATTCATGGCAGGGTGGGGGGGACTAGCATCACACGCTGATTCACAATATGATCCTTAATACTAGGTTGATTATGTAAATGACAAGAAATCCACCTAGTTTTGGCCCTACCGTAGTTTGCATTGCTGTAATTTAGCAGTTGTATGATGGAATTTAGGCAAAGCTCCAACCACCTCGAGCAAAATCTGTGATCTTGAGCTGTAACAGCTTGACCTGACCTTGTTGCTGCCGTTCCGAGCTTTGCATTCTTTCATTGCACACAGTTTACAATTACAACTGCGTACAcacaactagggctgcagctatcgattatttttgGTGCAGATTAATCCGTTGAATATTTTCGATTAGTTGGTCTATAAAAGGTCAGAAAATTGTGTAAtctgtggatcagtgtttcccaaagcccaagatgacgtcctccaatgtcttgttttgtccactaCTCAAGATATTCTGTTTAgggtcacagaggagtgaagaaactagaaaaggGCAGTTTGTAATTTATAAGCTACTTAATTTTGAAGTTAAGAAAGGTGAATAGAAAtctgttaaaaacaaaatagtctTTATTTAATATGAGTCATGTTTCCAAAGCCCATTGGACTTATGACTTACTGTACAGCTGTGCCAATTGGCACGGCATAGACAGCAGTGCCATACATCAGCGTTTATATGAATCCTAAGGGAAGTATGAATTATTGCCTTCTAAAGAACGCTGGTACCTTGGTAGTGCAGGTAGCTTTAAGAGGCTCTATCAGTCTGTCCAGTCTTTGGAGAACAGCTGCCGGACACAGAGACGCCAGTCGAGCCAACATCAGGAAAGTCAGCatctaca

Function

NR:

description
PREDICTED: cullin-associated NEDD8-dissociated protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58081 False 2132 lncRNA 0.46 6 33022345 33042122
TU58083 True 2195 lncRNA 0.43 2 33032050 33042122

Neighbor

gene id symbol gene type direction distance location
sec13 sec13 coding downstream 20604 32995440 ~ 33001741 (-)
LOC120557282 NA coding downstream 27051 32984503 ~ 32995294 (-)
LOC120557279 LOC102208494 coding downstream 41223 32971120 ~ 32981122 (-)
si:dkey-222f2.1 LOC104931984,LOC102780474 coding downstream 53398 32955423 ~ 32968947 (-)
LOC120556763 NA coding downstream 107617 32898688 ~ 32914728 (-)
LOC120557090 NA coding upstream 27027 33069149 ~ 33073198 (-)
LOC120557795 NA coding upstream 48397 33090519 ~ 33099181 (-)
LOC120557797 NA coding upstream 63925 33106047 ~ 33153839 (-)
LOC120557799 NA coding upstream 125048 33167170 ~ 33177332 (-)
LOC120557798 NA coding upstream 137546 33179668 ~ 33185020 (-)
G43173 NA non-coding downstream 150248 32871842 ~ 32872097 (-)
G43163 NA non-coding downstream 175243 32845424 ~ 32847102 (-)
G43161 NA non-coding downstream 179836 32839751 ~ 32842509 (-)
G43168 NA non-coding downstream 185359 32836786 ~ 32836986 (-)
G43167 psmf1 non-coding downstream 191027 32819999 ~ 32831318 (-)
LOC120557801 NA non-coding upstream 18299 33060421 ~ 33065026 (-)
G43329 NA non-coding upstream 293369 33335491 ~ 33336768 (-)
G43331 NA non-coding upstream 295235 33337357 ~ 33338295 (-)
G43334 NA non-coding upstream 298260 33340382 ~ 33345803 (-)
G43401 LOC105888650,LOC101068541,LOC105896821,LOC106933405,LOC105891059,LOC106527799 non-coding upstream 474776 33516898 ~ 33517368 (-)
podxl2 podxl2,LOC102777608 other downstream 238509 32750792 ~ 32783836 (-)
LOC120557401 blcap other downstream 275235 32688020 ~ 32747110 (-)
LOC120557755 grip2,LOC103357845,LOC102782189 other downstream 2006698 30946332 ~ 31015647 (-)
LOC120558045 NA other downstream 2343263 30638971 ~ 30679082 (-)
romo1 romo1,LOC102788570 other downstream 2892028 30125751 ~ 30130317 (-)
LOC120557803 NA other upstream 145946 33188068 ~ 33223258 (-)
LOC120557840 svbp other upstream 484375 33526497 ~ 33530867 (-)
LOC120557811 fam120a other upstream 869258 33911380 ~ 33953932 (-)
setd5 setd5 other upstream 1816700 34858822 ~ 34925111 (-)
slc2a10 slc2a10 other upstream 2409883 35452005 ~ 35464535 (-)

Expression


Co-expression Network