steap3 (steap3,dbi,LOC107560815,LOC107747240)


Basic Information

Item Value
gene id steap3
gene name steap3,dbi,LOC107560815,LOC107747240
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 19568749 ~ 19586103 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU101560
CTGTGAAGCATGCGTATGAGACTGTTCAAGGCAGGACTGCAGAGTTGAGTGTGACCGGTGCTGGGGGCAGCTGGCTAACAGATAAGCTACAGAAATCATGACTGAGGAAGCATTTCAGAAGGCAGCGGAGGAGGTGAAGCAGCTGAAGGCAAAACCATCCGATGCCGAGATGCTGGAGATCTACAGTCTGTTCAAACAGGCCACAGTAGGAGACGTCAACACCGCTCGGCCCGGCATGTTAGACTTCACTGGTAAAGCCAAGTGGGATGCCTGGGACGCAAAGAAAGGTATGAGTAAGGAGGATGCAATGAAGGCTTATATCAGCAAGGTGGAAGAGCTGAAAGGAAAATATGGAATCTAAAGTGTAACTGTGTGACACACTAGTGTCACCTTCTGGCAAGTCTGTCAATACCTTCGGTCCTGTGTAATGCATTATACCTCCTGGTGTGTGTCCATGTTTGTGCGATACATCTCATTCACATGAAGACTGTTGGAACGACTCATATGGCACAAAGCCCTTTTGAGCCTACAGACACCATTCACCAGCAGCTGTATAGTGAAACCCTCTGCAGACTTTTTTTACGTGTCAGTACTTCCATAAAGCCTGTTCACTTTTCAGAACCTTTGTGTctgtagtttttaatttatatttttgttgagCTGTTTATGGCAGATTGCGTGTCAGCATCAGTGATCTGCATAAGATAATACACATGCTGTTTTTCAGACCACTAATTCTTACAGATGTATTGGAAATAAATGGCCATAATAGAGGTAAACagagataaaataattaaatatggagtgtgtgtacagtgatgTACTGATCcaatttttatatgtattagGGCTGTGTAAAACACTGGATTGGCACTGGATTTGATATATTTTCAGAATCTCTTGTGTGTTTTATACTGCCAGTATGTGTGATAGTGACACAGACTTTATACATGAGGAGATGATATCATATAAAACATGATGCCACC
>XM_026912726.2
cacacacagtacagaggGTAGAGACTCGCTGGGAGCTGCTCAGTGCACGAAGAACAACAGCTATGTCGAATGACATGAGTGCCCCTCTTCTCTTGGATGAAGAGGAGAGAGTTGATGCTGCGAATGTGACTTCTAGTTCTTCCACTGTGGCCATACTGGGTTCTGGTGACTTCTCACGCTCCTTGTCTATGCGGCTGGTGGCATGTGGGTATGGTGTGGCGGTGGGGAGTCGCTGTGTGAAGCGCATTGCTCCTGGTCTGTTTCTGGATGCGGTGGAGCTGAGCAGTCAGGAGGAAGCAGTAGCGAAAGCCAAGAGTCTGGTCTTCATGGCCCTGTTCCCTGAGCACTATCCATCCCTGCTGGGCCTCAGATCAGCCCTGGCCGGAAAGATTCTTGTGGATGTGAGTAATGCTGTGGATTTGAGCAGCAACAGACCATCGAATGCAGAGCAGCTTGCCGAGATGTTCCCAGACAGTGTGGTTGTTAAAGGCTTTAACACAATTTCTGCCTGGACTCTGCAGACTGGTGCACAGGATGGCAGCCGGCAGGTGCTGCTGTGCAGTGACAGTGCAGAAGCAAAGCATGAGGTGGCCCAGCTCGCCCGGCGCATGGGCTTCTACCCAGTAGATGTTGGCAGCCTGTGCTGTGCACAGGAACTTGAAAGAAAGCCCTTGCATCTCTTCCCTTCTTGGCGCGGCCCTGTCCTCACCACCTACctgctcttctttttcttctactGCTATGGGTTTATCCGTGGGATTCTCCTGCCATACATAGCCTATGGACAAAACTCCTTTTACCGCCTAGTCTTTGACCTAGTGAATGAAAGCCTGCCGTGCGTGGCGCTGGTCAGTCTGGCACTGGTGTACCTGCCGGGGCTGTTTGCAGCATGGCTGCAGCTGCGGAGAGGCACCAAGTACCAGCGTTTCCCCTGCTGGCTGGATGCTTGGCTGCTCCGGAGGAAACAGCTAGGCCTACTGAGCTTCCTGTGTGCTGCTCTGCATGGAGTGTACAGCCTCTGCCTTCCACTGCGTACCATCACACAACACAGACTCATCAACGCTGCTTACTCACAGGTGAAGGCAGGTGTGGAGATGCCGTGGGATGAACAGGGTGTATGGCGCACTGACCTCTATGTGTCCAGTGGAGTGTTAGGTCTGggcattctctctctgttgGCTATCACATCTCTCCCCTCAGTGGGCAACATCCTCACGTGGAGGGAGTTCACCTTCATTCAGTCTGGACTGGGATATGCTGctttgactctctctctcatgcacacgTTGGTGTTCGGCTGGAATTTTGCCTTCTCCTCCCAGACCTATGCATTCTACATGCCACCCAGCTACATGCTAGCTTTGGTTCTGCCGTGTGCCGTGCTGGTGTGCCGATGTTTCCTGCTGCTGCCCTGTGTCTCCGCCAGGTTGGCACGCATACGCCGGGGCTGGGAAAGCACACGCAAATGCCCTGTGTCACAGCACCACCGAGCGCGGGTGGAGAGGACAGCTACAGAAATCATGACTGAGGAAGCATTTCAGAAGGCAGCGGAGGAGGTGAAGCAGCTGAAGGCAAAACCATCCGATGCCGAGATGCTGGAGATCTACAGTCTGTTCAAACAGGCCACAGTAGGAGACGTCAACACCGCTCGGCCCGGCATGTTAGACTTCACTGGTAAAGCCAAGTGGGATGCCTGGGACGCAAAGAAAGGTATGAGTAAGGAGGATGCAATGAAGGCTTATATCAGCAAGGTGGAAGAGCTGAAAGGAAAATATGGAATCTAAAGTGTAACTGTGTGACACACTAGTGTCACCTTCTGGCAAGTCTGTCAATACCTTCGGTCCTGTGTAATGCATTATACCTCCTGGTGTGTGTCCATGTTTGTGCGATACATCTCATTCACATGAAGACTGTTGGAACGACTCATATGGCACAAAGCCCTTTTGAGCCTACAGACACCATTCACCAGCAGCTGTATAGTGAAACCCTCTGCAGACTTTTTTTACGTGTCAGTACTTCCATAAAGCCTGTTCACTTTTCAGAACCTTTGTGTctgtagtttttaatttatatttttgttgagCTGTTTATGGCAGATTGCGTGTCAGCATCAGTGATCTGCATAAGATAATACACATGCTGTTTTTCAGACCACTAATTCTTACAGATGTATTGGAAATAAATGGCCATAATAGAGGTAAACagagataaaataattaaatatggagtgtgtgtacagtgatgTACTGATCcaatttttatatgtattagGGCTGTGTAAAACACTGGATTGGCACTGGATTTGATATATTTTCAGAATCTCTTGTGTGTTTTATACTGCCAGTATGTGTGATAGTGACACAGACTTTATACATGAGGAGATGATATCATATAAAACATGATGCCACCAA

Function

symbol description
dbi Predicted to enable fatty-acyl-CoA binding activity. Orthologous to human DBI (diazepam binding inhibitor, acyl-CoA binding protein).
steap3 Predicted to enable cupric reductase activity and ferric-chelate reductase (NADPH) activity. Predicted to be involved in copper ion import. Predicted to act upstream of or within ion transport and iron ion homeostasis. Predicted to be located in endosome membrane. Predicted to be integral component of membrane. Predicted to be active in endosome and plasma membrane. Orthologous to human STEAP3 (STEAP3 metalloreductase).

NR:

description
metalloreductase STEAP3-like isoform X2

GO: NA

KEGG:

id description
K08762 DBI, ACBP; diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein)

RNA

RNA id representative length rna type GC content exon number start site end site
TU101560 False 986 TUCP 0.43 4 19568751 19573463
XM_026912726.2 True 2411 mRNA 0.50 9 19568749 19586103

Neighbor

gene id symbol gene type direction distance location
tmem37 tmem37 coding downstream 688 19565266 ~ 19568061 (-)
cobll1b cobll1 coding downstream 32345 19496806 ~ 19536404 (-)
fign fign,LOC107722902 coding downstream 196661 19330693 ~ 19372088 (-)
LOC113526240 kcnh7 coding downstream 319542 19184821 ~ 19249207 (-)
ifih1 ifih1 coding downstream 385846 19161216 ~ 19182903 (-)
insig2 insig2,LOC107549777,LOC107689500,LOC107670326,LOC107752584,LOC107720943 coding upstream 89812 19675915 ~ 19681540 (-)
ddx18 ddx18,LOC107673737,LOC107741906,LOC107660632 coding upstream 106858 19692961 ~ 19702648 (-)
LOC113525964 dpp10,LOC108424244,LOC107569026,LOC107572644 coding upstream 199988 19786091 ~ 19876995 (-)
actr3 actr3,LOC103365687,LOC107660280,LOC101066039 coding upstream 318871 19904974 ~ 19918083 (-)
LOC113525902 LOC108266171 coding upstream 462688 20048791 ~ 20077583 (-)
G85493 NA non-coding downstream 24899 19543611 ~ 19543850 (-)
G85459 NA non-coding downstream 90355 19464152 ~ 19478394 (-)
G85461 NA non-coding downstream 95428 19473006 ~ 19473321 (-)
G85460 NA non-coding downstream 101573 19464775 ~ 19467176 (-)
G85382 NA non-coding downstream 299797 19268662 ~ 19268952 (-)
G85749 NA non-coding upstream 317827 19903930 ~ 19904289 (-)
G85767 NA non-coding upstream 350804 19936907 ~ 19937123 (-)
G85768 NA non-coding upstream 351301 19937404 ~ 19937613 (-)
G85774 NA non-coding upstream 363488 19949591 ~ 19950708 (-)
G85782 NA non-coding upstream 389302 19975405 ~ 19976607 (-)
grb14 grb14 other downstream 74234 19443091 ~ 19494515 (-)
LOC113526313 baz2b other downstream 600257 18913387 ~ 18968492 (-)
evx2 evx2,LOC107657379,LOC107671304 other downstream 1868769 17695290 ~ 17699980 (-)
sp3a sp3 other downstream 2187577 17371979 ~ 17381172 (-)
mettl8 mettl8 other downstream 2528906 17028237 ~ 17039843 (-)
G85848 NA other upstream 640625 20226728 ~ 20237615 (-)
abcb6b LOC108266852,LOC108423985,LOC107596549,LOC107750068 other upstream 808368 20394471 ~ 20423244 (-)
phgdh phgdh other upstream 1549943 21136046 ~ 21144621 (-)
dhrs9 LOC108423955,LOC108423956 other upstream 1713769 21299872 ~ 21305299 (-)
LOC117597354 NA other upstream 1871630 21457733 ~ 21459404 (-)

Expression


Co-expression Network