G97575


Basic Information

Item Value
gene id G97575
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8664075 ~ 8668051 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU121653
gaggggataaaggggagaggagaggagagagggaagaagaggagagagaggggagaagagagaagataataaccacacacacacacacacacacacacacacacacaagcatgtaTAGGCACCCATATGCACAcgaacacaaacacacgctgATGATTGCATGCCCTGatgcattaacacacacacacacacacacacacacacacacacacacacacagacacacacaccgacaTAGGCACACTCTAACTCTGATATacctctgacacacacacactaacagacaAACACTCGCACATTGACAGAAGGACGCACACAcacgcccccccacccccatctctctctctcgattcTGGGTCACTTTGGGTGATTCATTTactcactttattttaatattattattatcattctttttcaattgtgtttgtgcttttgtCCTTTTTACTGTGTTCCCCAAACAAGGGATGGGAGAatgagaaatgcaaaaaaaagaaaacacgaGAGGAGGAAGAAGCAGATGAAAAGAAAGACTTGAATTTTGAAATGGACAAATGAACCCAGCAGACTGGACTTGACACCACCTTGataccccccacacacacacacttacacacacacacatacacacacaccaacacacacacactcacacactcactgtccTGGACTGTCCTACCATTCACACCCcgccaaaatacaaaactgtattaattaGTGTGGGGCATACGTATTTATgtgctaaaaaagaaaaatcgatattgtttaatatttgttttcttttattattattattatttttatttcaattgttggctgtattttatttttaagacgaACTCAACTGAAACTTTTGCCACGGTGAAAAGGGTCTGAAAGAAGTTTAACAAGGGAACGCATTAAAGTgtaatcttttattattattattattattattattattattattattattattattatatgaaatcTGCTGTATATCATGGAAGCCTGATATCGAGCGTCGGGATTGGACGCAATTTGGGGGTCAAAGTTCATCCTCGCCAAAGCAGAtgagaagtgtgtgtttgtagaggCCGCTTGTGCTGATTTGATCACAGCACACACCCCTGTCCACTCTAGAAGTTCTAGGAGGGGGGAAAACATCAACAATCCtgtccttcattttttttcttctctaccTCTCCTACTCCctctttcctcttcttcttcagaCCAGTCATTCACTTACTTTACCTCCACCTCTCTCTagtctctccccctccttcccctcccctctctctctctctccctccttgttCCTTCAGTTCAGAGAATTTGGGTCTGGACTCTTTACTCTTGGGGGCCAAATCAGTGTCTCAGACAACTGGAGCAGTGGTGAGCGGCGGCCATTAAATTCGACCCATTGCAGCACAACGCTGAATCACATTGAGGTGAAGGgtagagagaagagagagagattaatagaTCTGTAGTGTGGATAGATGGAGAGAGAAGGCCAGGTACATATTCGGTACACCTTTATCTTTAGccccctgtgtgtgtgggtctatTCTCAGCGAGTTCTATTTTCAGCCCGTTGCTAGGAGACCGTCGCCGGGAGCCATTGTTCCAGTCGTCAGGGTGTCGGCGGGAGTGGGGCGTGCCCTCGCCTCAGCTCCCAGTGTGATGTCACAGCCTGGCACTACCCCAGCCACTGTGACATCACAGCGGGGGGGGGTTGCAGAGTCGGGCAgacccaacacacacagacactactAGCAGAGAGTGGAATTGTGCAGTCAGTGAGAGAGTAGgaagtgaagtgtgtgtgtttggaaacaGGCAGACAGACTGGAGAGgaggagtggagtggagtggaatGGGGGGGCAGTAGCTTCTTATTCAGAATCCATTCAGAtcctgatacacacacacatacagagagacacTATCCCTGgaacacacaaactgacaatCATACcttgcacatgcacacacttctACCAATatgcacacatgcagacacGTACACACCACTTCTCACACCCACTcgctctccctctttctctccctctctccctctctgcacaGGTGTCAtttggggggttgggggagggAGCTTTCCCCTAACAGGATGAACTTTGACCTCTGCCGAGATTGTAGTTGCCACGCCCAATCTAGCACAGCTGTGATTGGTCCATCTGTGGTCAGGTGAGGTGGTCACCTGTCTTCAGCCCTGAGGGCTCTTAGAGCTCCAGCCTGCTTGTGCACCACGCTGCCCTGGAGAGTGTAGGGGGTGTTGGCCAACCAGGGGAGCAGCTTCCTGTGTTCTTAGCCCTGTGCCAAAGACAGACTTTGCCAGTTGGGGTTGACGTGCTGAGTTGTTAAATAATTGACTGCAACTGCCAGAAGGCCAACCCCGGTCTAACCCCGCTCCCTAGAACATTTCTGGGTCAGGATCTTCCAGACGTGGTTGGAGTGGGCTTCACAAATTAGCTCATTGTAAGTCAAAGTCAGCTCCATCCAACTATCAATTGTCCAGGGGTTAAGGTTCTGTTGAGTGACACCAAAATTATCCAATAGGATACTGGATGATGTAACCCTCAGCCAGTTGGCAATTTGGGCAGTTTTCCTGATTGTCCAATCGCAGCTCGGTCATTGTCAAGCTTGCCAATCATGTTTGGGGTATTTGAGAATCCGTCATTGGTAGTTTGAGTGGCAGGAGGAAGCAGCCAATCGTGGCATGGGGTCAGGGTCAGGTGACAAAACCAGGTGGAACTCCTTTTTAAACTGACACTTCTGTTCCCTGGGTATTGTATCCTTTTCgtctctttttatttccttatttaaaaaaatatatattattattattattattattattatttatttttgttttattttatgcgTTTTGGTCTTTTTCATTTGGTACTTACCTGTGCAATGTTTACAGATTCTAtagggtaaaaaaaataataataatgaaacaagaaTATATcggataaagaaaaaaaacaaaatgtgttttattatcgAGTATCATGTTCATTTCTCTTGAATACGACAAATTATCTATGAACCTTTTAATGACAAAGAAAgagaataacacaaaaaaataaatgttgaaataattagatttattttttatttttatttctttactgaTTTTCATTGCATGTTGCCTGTTGTCCATTAGCCAGATGATCTTGTGCTGTTGTGGTCGCTGCTCTTGTCATGATTAATGTTCGGTAGACCAGACTATAAGActgaatgtgtctgtgtatatctCTCACTGTTTGTTTGCTACCTTCTCAACTGTGACTTCGTGTGAATCCCTGAGAAAGAACAACACCAGAGTGTTTTCTATATGTGTTGCTGTGTTATTATTCTGATGCACACTCCTCTCTTGCTCTTTGTGGCTCTCTCCCTTGCTCActcgctttctctctctatctccctctctctctctctgtcagtctctccCCCATCTCCCTTATCCCAGgcttcccccctccctctcatccctgtctgtctctttccctTATCCCTGTCTCCCACCCTTCCATCGTTCCCActctcccaccccctccctctctctctctcccgttgtctctccctgcctctctcgtTCTGTATCcctgctttttttcttcaaactaGCCTGCAGTTGGCCATAACTTTTATTATTCACATACTTATAATCATTTctctgtatgtgagtgtgtgtgtgtgtgtttgtgtgtgcatgtgcgtgtgtgtccgtgtttctctctctcatgccTCAAAACCTCTTTGAATCTCCCTGCtctgtattgtatgtatttccgtgtgtatgtttgtatgtgtgtttgtatgtttgtagaAACTTTGTATCCAAACAAAatggagagggaaaaaaatacagaatgaaaaaaaagaaccaCAATGAAAGGAGCCTTGTGTTGTTTAAACCACGCATTTTGggtcttttattttgaattattatacaCTGAGATCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121653 True 3977 lncRNA 0.44 1 8664075 8668051

Neighbor

gene id symbol gene type direction distance location
AMCG00015379 ppp1r14b,LOC108268202 coding downstream 40359 8613256 ~ 8623716 (-)
AMCG00015380 NA coding downstream 55767 8601327 ~ 8608308 (-)
AMCG00015375 NA coding downstream 128675 8534379 ~ 8535400 (-)
AMCG00015371 NA coding downstream 135393 8526032 ~ 8528682 (-)
AMCG00015373 NA coding downstream 169215 8486551 ~ 8494860 (-)
AMCG00015387 LOC108267603,LOC106603153,LOC107583282,LOC107721660 coding upstream 153 8668204 ~ 8671343 (-)
AMCG00015385 LOC108428058,LOC107568312,LOC107715375,LOC107669368 coding upstream 17716 8685767 ~ 8687647 (-)
AMCG00015386 NA coding upstream 65284 8733335 ~ 8734447 (-)
AMCG00015388 ppp2r5b,LOC107588189,LOC107749805 coding upstream 91814 8759865 ~ 8777414 (-)
AMCG00015384 NA coding upstream 114609 8782660 ~ 8784858 (-)
G97574 NA non-coding downstream 7254 8655173 ~ 8656821 (-)
G97562 NA non-coding downstream 29415 8612495 ~ 8634660 (-)
G97561 NA non-coding downstream 52679 8610947 ~ 8611396 (-)
G97536 NA non-coding downstream 65776 8596735 ~ 8598299 (-)
G97475 NA non-coding downstream 230759 8431923 ~ 8433316 (-)
G97589 NA non-coding upstream 51195 8719246 ~ 8719559 (-)
G97801 NA non-coding upstream 112686 8780737 ~ 8782633 (-)
G97805 NA non-coding upstream 399892 9067943 ~ 9072138 (-)
G97860 NA non-coding upstream 426104 9094155 ~ 9110050 (-)
G97861 NA non-coding upstream 445965 9114016 ~ 9529153 (-)
AMCG00015372 lrfn4,LOC101077706,LOC106517947,LOC102210474,LOC101487083,LOC102311587 other downstream 81389 8579500 ~ 8582686 (-)
AMCG00015374 NA other downstream 118280 8541188 ~ 8545795 (-)
G97455 mark2a,LOC107715377 other downstream 252193 8409987 ~ 8411882 (-)
AMCG00015361 NA other downstream 294044 8361614 ~ 8370031 (-)
AMCG00015348 ehd1b,LOC107718765,LOC107720605,LOC106603140,LOC107548869,LOC106930329,LOC103471421,LOC103136898 other downstream 380446 8223199 ~ 8283629 (-)
AMCG00015393 zgc:77262,LOC107715378,LOC107669316,LOC107568302,LOC108428054,LOC107567914,LOC108278748,LOC107700012 other upstream 121609 8789660 ~ 8794774 (-)
AMCG00015394 NA other upstream 161251 8829302 ~ 8838979 (-)
AMCG00015400 NA other upstream 286462 8954513 ~ 8960144 (-)
AMCG00015409 NA other upstream 370545 9038596 ~ 9040141 (-)
AMCG00015415 NA other upstream 484167 9152218 ~ 9156447 (-)

Expression


Co-expression Network