G161193


Basic Information

Item Value
gene id G161193
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056722.1
NCBI id CM032091.1
chromosome length 21790128
location 6308601 ~ 6308962 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU238741
CCTGTCAGGTAACCTGCGGTCTGGGAATCAGAGATGAAGAGGTCGTGTTTCTGGTCTTTGAAGGCACTCCACACAGTAGAACGAGCGAGGATCTCGTtcacctaaaacacacacacacacacacacacacacacacgtcaaacACGTCCCTGGTTCAGCTCTGGACGGCTGTACAGCGCCGCTGGTCGAGGATGATACCTGTTCTCCAAACTGCAGGCTGCGGGTCATGGACTTGAGAGCTTTGACGATCTGAGCTTTGGTCGCTGATGGGTTTTCTAGAGTCTCCAGCCCGACTCCCTCCAGCAGCTTCAGCAGATACGGCACCAGATCTACCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU238741 True 336 lncRNA 0.54 2 6308601 6308962

Neighbor

gene id symbol gene type direction distance location
LOC122329460 LOC107570661,LOC107705132 coding downstream 78206 6170195 ~ 6230395 (-)
LOC122330271 pard3,LOC107690576,LOC107557790,LOC107749111 coding downstream 211171 6093017 ~ 6097430 (-)
LOC122329399 fbxl7,LOC107653805,LOC107714010,LOC107566917,LOC107718179,LOC107722558,LOC107689422,LOC107688519 coding downstream 248063 6051285 ~ 6060538 (-)
rmdn1 rmdn1,LOC107678485,LOC107729932,LOC107668150,LOC107756855,LOC107735575 coding downstream 294850 6010738 ~ 6013751 (-)
pigm pigm,LOC107573292,LOC107572623 coding downstream 312938 5991972 ~ 5995663 (-)
vopp1 vopp1,LOC107728740,LOC107757191,LOC107693470 coding upstream 177569 6486531 ~ 6506257 (-)
napga napg,napga,LOC107655688,LOC107734322,LOC108431250,LOC108271818,LOC107653787 coding upstream 756297 7065259 ~ 7071527 (-)
cdk13 LOC107653808,LOC107713640,LOC107655698,LOC107734321 coding upstream 763490 7072452 ~ 7088200 (-)
itgb1a itgb1a,LOC107565694,LOC107566918,LOC107653806,LOC107734314 coding upstream 833013 7141975 ~ 7168191 (-)
nrp1a nrp1a,nrp1,LOC107565689 coding upstream 862556 7171518 ~ 7232261 (-)
G161191 NA non-coding downstream 1409 6306266 ~ 6307192 (-)
G161146 NA non-coding downstream 292808 6015215 ~ 6015793 (-)
G161140 snx16 non-coding downstream 306021 5998292 ~ 6002580 (-)
G161093 NA non-coding downstream 514343 5792609 ~ 5794258 (-)
G161088 NA non-coding downstream 579986 5727559 ~ 5728615 (-)
G161184 NA non-coding upstream 827 6309789 ~ 6311843 (-)
G161228 reck,LOC107757182 non-coding upstream 92462 6401424 ~ 6404937 (-)
G161229 NA non-coding upstream 94538 6403500 ~ 6446582 (-)
G161227 NA non-coding upstream 96134 6405096 ~ 6405735 (-)
G161223 NA non-coding upstream 143450 6452412 ~ 6509781 (-)
LOC122330195 pard3,LOC107713921,LOC107734328,LOC107692754,LOC108431315 other downstream 187684 6100744 ~ 6120917 (-)
LOC122329398 fbxl7,LOC107718179,LOC107689422,LOC107589836,LOC107688519,LOC107722558,LOC107585539,LOC107653805,LOC107714010,LOC107566917,LOC107734313,LOC107565690,LOC107655697 other downstream 221785 6063599 ~ 6086816 (-)
G161139 NA other downstream 311911 5996101 ~ 5996690 (-)
rheb rheb,LOC106579659,LOC107653878,LOC106590380 other downstream 885533 5372155 ~ 5423068 (-)
LOC122329620 LOC107711609,LOC107569850,LOC107554368,LOC107560358,LOC107568663 other downstream 1018179 5287164 ~ 5290422 (-)
G161224 lancl2,LOC107561957,LOC107693471,LOC107566172,LOC107655705 other upstream 87209 6396171 ~ 6470101 (-)
G161327 LOC107713878 other upstream 636224 6945186 ~ 7005408 (-)
ralaa ralaa,rala,LOC107565693,LOC103042957,LOC108268083,LOC101477841,LOC107655676 other upstream 781552 7090514 ~ 7096839 (-)
pard3aa pard3,LOC107713921,LOC107734328,LOC108431315,LOC107692754 other upstream 1081133 7390095 ~ 7838521 (-)
LOC122330139 lyrm4,LOC107692762,LOC107570464,LOC107653796,LOC107713738 other upstream 1729785 8038747 ~ 8082930 (-)

Expression


Co-expression Network