LOC122329481 (LOC107593121,LOC107713971)


Basic Information

Item Value
gene id LOC122329481
gene name LOC107593121,LOC107713971
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056722.1
NCBI id CM032091.1
chromosome length 21790128
location 8216466 ~ 8226923 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225729.1
GCCTGGATCTTCTCAGCAGACCATCTCCTCTACAGAGACCGCAAACGGCGAGACATCTTGTGTACATCATGCAAAAATTACCTCCGCACGTGAAACATCAAAATGGCCGCATTAACTTTGCCAGATCAAACACAGAGGAGTTTAACCTACCTGAGACGGAGTATTTTGAAGGCGTCATGGCTAGAGCACCAAcaacACAAGCTCTCTCAGTAGTCAGTGTTGATATGCTTGTGACGGACAACAAGAAAGCGCACAACACCAGTCGGTACCAGAACAACAGCCTCATAGTGCGCAGGAATAAagaattcttcatcatcatcaagtTTGACCGACCCTTCAATAACCAGCAGGACAATGTTCAGATAGAGTTCACGATTGGAAGTTCGCCTGATGAAAACAGGGGCACCTACATGATCGTGTCCATCGGAAAAGAGAAACGTGACGGGCGCTGGAACAGCCGCATGATTGGCACGCAAAACAATGAAGCAACAGTGGGCATAACACCTGACTCCAGCTGCATCATTGGTCGCTTTTGCACATTTGTAACAGTAGTGAGTGAATTGGGAAAACAGCGCACTCCGAGGAACCCCAACACTGATTTCTATGTGCTGTTCAATGCTTGGGACCCGGCGGATGTGGTGTATATGCCCAATGAGAGCGAAAGACAGGAGTATGTGATGAATGATGTGGGGGTCATCTACAATGGAGAATTTAACAACGTAACCTCCCGCTCATGGAACTACGGCCAGTTTGAAGAGGGCATTCTTGATGCCTGTCTCTTGGTTCTGGATGCTGGGAAAGTACCTCTGATGTACCGTGGGAACGCCACTGAAGTAGTTCGGCAGGCATCAGCCCTGATGAACTCCCAAGACGATGATGGTGTCCTGGTTGGCAACTGGAGTGGAGACTACTCCATTGGCACCGCACCCACTGCCTGGACAGGAAGTATTGAAATCCTGCGTAAATATGCCAAAGGCGGTTGTGTGCCTGTTTGCTTTGCTCAGTGTTGGGTGTTTGCAGGTACACTGAACTCTTTTCTGCGGTGTCTTGGGATTCCTACACGAGTCATCACCAATTACTGCTCTGCTCACGACAACTCGGGAAACCTGAAGACTGACATTGTGCTGGACGAAGCCGGGAAGGTGGACAGAAGCCGCACAAGAGATTCAGTCTGgaactACCACAGCTGGAATGAGGTGTACATGAAGAGGCCTGATCTGCCTGATAAATACTCTGGCTGGCAGGTGGTTGACTGCACCCCTCAGGAGACCAGTGATGGTCTTTATCGATGTGGCCCAACGTCTGTCAATGCCATCAAGGAGGGACAGCTCAGCTATCCATTTGATGCAAGGTTTGTCTTTGCAGAGCTGAACAGTGATGTGGTTTACTATCGGTCTGATAAGTACGGAAACAAAAAGATTGTCAGTGTGGACACTACATATGTTGGAAAGCTCATTGTCACCAAAAAGGTGAACAGTGGCGCCTATGAAGACATCACTTCTAACTACAAATACCCAGAAGGCAGTGACAAGGACAAGCAGACCATGAAGATGGCAGAGAGTTGTGGCACTCCTGCCAGGGGTTACCAACCACTCCCAGAAACAGGTGTGAGCATCGAGCTCCAGGCCAACACCATCAGAATGGGTGAAAACTTTAAGCTGACGCTGAACATTAAGAACCAGACCAGCCAAACGTACAACATCTCTGCCACCATCACTGGCTGTGTGGTGTACTACACCGGCATCACCAGCTCAATCTTCAAAGTTGACGACAAAGTTGCATCCGTGGATCCCTGGAAAACTATGCAAGTGATGATTGATGTCAGAGCTTTGGAGTACATGTCCTACCTGGTGGAACAGTCCAACCTGCTGTTTGTGGTGCATGGACGCATTCAAGAGACCGGCATGGCCCTCACGACAATGAGAGTTATCACCCTCCAACCTCCTGATCTCACAATTAAGGTGACTGGATCACTCCTGGTTGGCAAGGCTTTCATGGTTATGGTTTCGTTCCGAAATCCCTTTACCTTCATCCTGACAAACATTCAGTTCCGCCTAGAAAGCCCTGGTCTGATGCcaaccaaaatgaaaacatacgATCAGATCGCCCCTGGTGGCTCGCTGCAATATACAGACATGATCACCCCTCAGTCTCCTGGGAAGAAGGTGCTGATAGCGTGTCTGGACTGCCCTACAGTGAGGCAGGTCACCAATCAGCTGGAAATCTTCGTGCAGTAACGGATTGCCGAGCGGAGAGAAAAAGGGCTCACGTAACCATTTCATTGAATTGCTTTGCTTTCATCACGAGCATTATCGAAATAAAAGCTAGCTTTTTTCCTTTACACTCACGCCTTCCAACAGTTTCCAACTCACGCTCGCGCCTTCCAACTTCCTTGACTgtacaaaaaacacaatcaaacaTTTAGTAGCCTACCGATACAGCACGCACGGTCTGATACTTTCCGATTAAATAATGCAGTTATCAGGAAAAGTTGTAAATTGGAAATGGGAGGAAGAGTGAAACATATCAGAAATGTTTTCAGGTATGCGTTTGAAGGATAATGTTTCTGCGGGTGTGCAAAATGTtcaatgcacacacaaaatatgaCCTACATAAACCAGAAACAGCGACGTGAAAAGTATTCTTGCACCAACAGAAGCCTGAGTGCATGCCAAACTTAGCTGTGAAGTAACAGAGCCGTATTAAAATTTAGTACGATTTTGTCTAAATTCCTGTTTTGGTTTGGTGCCTTAATTAACACAACTATTAATCTGACTGTATTAATCAGAATCTATTGCATATTTTCTCTGCTAAAATGCCACCGACTGTGTTTTACTAACATAAACAATAAACCTTCAGCATGAAA

Function

NR:

description
PREDICTED: coagulation factor XIII A chain-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225729.1 True 2866 mRNA 0.47 15 8216466 8226923

Neighbor

gene id symbol gene type direction distance location
nrn1a nrn1a,nrn1,LOC107734388,LOC107713755,LOC105890828,LOC106590090 coding downstream 3081 8207535 ~ 8213385 (-)
LOC122330133 LOC107729929,LOC107692759,LOC107570461,LOC107713955 coding downstream 187642 7980823 ~ 8028824 (-)
ly86 LOC107593115,LOC107653794 coding downstream 295475 7919552 ~ 7920991 (-)
rreb1a LOC107713689,LOC107692757,LOC107653799,LOC107552789,LOC107593105 coding downstream 301488 7868824 ~ 7914978 (-)
cul2 cul2 coding downstream 360732 7839930 ~ 7855734 (-)
sugct sugct,LOC107687505,LOC107713787,LOC106590081 coding upstream 84301 8311224 ~ 8400415 (-)
nck1b nck1b,nck1,LOC107683484,LOC107600141,LOC107713805,LOC107588047,LOC107734380 coding upstream 196969 8423892 ~ 8455125 (-)
slc35g2b slc35g2b,slc35g2,LOC107588046,LOC107687509,LOC107714021,LOC107683493,LOC103026733 coding upstream 231712 8458635 ~ 8463500 (-)
idi1 idi1,LOC107600144,LOC107683492,LOC107734386,LOC107713854,LOC107588045 coding upstream 268949 8495872 ~ 8499322 (-)
adarb2 adarb2,LOC107713870,LOC107734387,LOC107683482,LOC107687536 coding upstream 303185 8530108 ~ 8669130 (-)
G161603 NA non-coding downstream 9798 8203945 ~ 8206668 (-)
G161591 NA non-coding downstream 149883 8064731 ~ 8066583 (-)
G161558 NA non-coding downstream 182785 8033451 ~ 8033681 (-)
G161538 NA non-coding downstream 248423 7965924 ~ 7968043 (-)
G161546 NA non-coding downstream 259829 7956401 ~ 7956637 (-)
G161661 NA non-coding upstream 136587 8363510 ~ 8363991 (-)
G161668 NA non-coding upstream 247567 8474490 ~ 8474707 (-)
G161670 NA non-coding upstream 249250 8476173 ~ 8476475 (-)
G161671 NA non-coding upstream 249796 8476719 ~ 8477053 (-)
G161687 NA non-coding upstream 307045 8533968 ~ 8534191 (-)
LOC122330139 lyrm4,LOC107692762,LOC107570464,LOC107653796,LOC107713738 other downstream 133536 8038747 ~ 8082930 (-)
pard3aa pard3,LOC107713921,LOC107734328,LOC108431315,LOC107692754 other downstream 377945 7390095 ~ 7838521 (-)
ralaa ralaa,rala,LOC107565693,LOC103042957,LOC108268083,LOC101477841,LOC107655676 other downstream 1119627 7090514 ~ 7096839 (-)
G161327 LOC107713878 other downstream 1211058 6945186 ~ 7005408 (-)
G161224 lancl2,LOC107561957,LOC107693471,LOC107566172,LOC107655705 other downstream 1746365 6396171 ~ 6470101 (-)
G161893 LOC107563058 other upstream 1704372 9931295 ~ 9932802 (-)
G161992 NA other upstream 2053874 10280797 ~ 10286608 (-)
myo3a myo3a,LOC107687530,LOC107675224,LOC107739129,LOC107758395,LOC107570047 other upstream 2139250 10366173 ~ 10436463 (-)
zgc:174877 zgc:174877,LOC107687531,LOC107709772,LOC107588023 other upstream 2224636 10451559 ~ 10458476 (-)
dpp6a dpp6a,dpp6,LOC107755713,LOC107664663,LOC107655790 other upstream 2439588 10666511 ~ 11010248 (-)

Expression


Co-expression Network