G15125


Basic Information

Item Value
gene id G15125
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 32747931 ~ 32766206 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU20345
AATTAAAGGTCTCTAATTCGTATCTTCCTGAATCTTCTTTCTCTGCTCTGGTTATTATCATGGTTTTGTTTTCAGTATTAAACTGCCATCTTGGATCTGGAGGTTTTATTCTgattgtttggtttttaaatTGGAAAATACGATCAGTAGAAGTTTCACTGTTGAtcttgtttaatattaattccTCCTCTTTAGGAAGCTGCAGGTCCAGCGGGCGTCCCACAGCTCCAtaaaacacacagctctgatcaGATCTGCACTGATCATCTACTGTAATCAGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20345 True 283 lncRNA 0.44 2 32747931 32766206

Neighbor

gene id symbol gene type direction distance location
LOC103039461 LOC108277608,LOC108432448 coding upstream 52470 32660879 ~ 32695461 (+)
noa1 NA coding upstream 102210 32639913 ~ 32645721 (+)
igfbp7 igfbp7 coding upstream 126479 32609520 ~ 32621452 (+)
LOC103035388 NA coding upstream 139149 32594641 ~ 32608782 (+)
LOC103039765 cpxm1b,LOC108432441,LOC108274665,LOC105911438,LOC107587055 coding upstream 154550 32569606 ~ 32593381 (+)
srp72 srp72,LOC107662169,LOC107552350,LOC107731365 coding downstream 17980 32784186 ~ 32794356 (+)
arl9 arl9,LOC107552351,LOC107729322,LOC107731368,LOC107662170 coding downstream 29112 32795318 ~ 32798887 (+)
thegl NA coding downstream 35128 32801334 ~ 32809334 (+)
slc16a2 slc16a2,LOC107731360,LOC107758472,LOC107552352,LOC108279893 coding downstream 111507 32877713 ~ 32906232 (+)
ints10 ints10 coding downstream 178493 32944699 ~ 32955288 (+)
G15119 NA non-coding upstream 11733 32733830 ~ 32736198 (+)
G15120 NA non-coding upstream 14305 32732245 ~ 32733626 (+)
G15121 NA non-coding upstream 26300 32721307 ~ 32721631 (+)
G15117 NA non-coding upstream 40076 32707629 ~ 32707855 (+)
G15114 NA non-coding upstream 47019 32700520 ~ 32700912 (+)
G15141 NA non-coding downstream 56368 32822574 ~ 32841503 (+)
G15162 NA non-coding downstream 131220 32897426 ~ 32912141 (+)
G15163 NA non-coding downstream 134246 32900452 ~ 32910957 (+)
G15166 NA non-coding downstream 137150 32903356 ~ 32970944 (+)
G15167 NA non-coding downstream 146023 32912229 ~ 32913561 (+)
G14985 NA other upstream 569333 32174401 ~ 32178598 (+)
smim13 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766,LOC107669968,LOC107734024 other upstream 702868 32041035 ~ 32045063 (+)
LOC103035097 fam193b other upstream 1570339 31161067 ~ 31177592 (+)
LOC103032125 NA other upstream 1975778 30739044 ~ 30772153 (+)
G14638 rps15a,MGC114789,RPS15A,LOC107686992 other upstream 2479549 30260677 ~ 30268382 (+)
G15160 NA other downstream 154818 32921024 ~ 32924785 (+)
G15170 NA other downstream 257030 33023236 ~ 33066558 (+)
nsg1 LOC108431918 other downstream 1257117 34023323 ~ 34121443 (+)
G15411 mcm7,LOC102777806,LOC107716516,LOC107744067,LOC107665623 other downstream 1453737 34219943 ~ 34228038 (+)

Expression


Co-expression Network