G15167


Basic Information

Item Value
gene id G15167
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 32912229 ~ 32913561 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU20398
cttcttcttcttcttctgttttttcttcttcttccacttcttctgctttttcttcttcttcttcttcttcttctttcagtCCAATCCGAGCTTCACGATGGAATGcgcatatttttatatatcggCCAATAGCTGAAGACTTTACTAATTACTGTTATAGATGTTAATTTGTAGAATATTTtccttttatctcttttttgtttttgatcttTTACATTATCAGagattattgttgttgttaaagTTGACTGATCATGTTACATAATGTGTCTCTAACAATAAGTGCAACTCGGCATCCACCAATCAGCATCATGCAGTTTGCgtattgctaatgctaatgctaacactagTGCTAGTGctaattttttttggttcatttaTTGTTAGCATTTAGCAACTTAGCATATTTCATTATTGTTTTCTCATTGATACTTTGTTAAAAACAGTTCAGTAATTAATTCATGTGTAATAATATGTGTCACTCGAAAGTTAATAATCAATAGATCGTATTGATCAGTGAAGTTCGGCAGTTCTTCCAGTAAATTCCACAGTTGtgcctgtttttaaaaaagggccgatagaaataatagaaatagaaaatctCCACTGTTCACTTCTAGtttttattaagaagtttaTTGATTAGCGATTAATGAAATTGATTAAGTTTCCACAGATCTGATggacttttaaactgtaccgagTACAGACTCACGTATGTATGCGTatagattatatataaatataaagatcacgttttattttttgtaatcttGTACATATTTTAATCACCCTGTAGCTTTACGAGCGTTCTGATTACAGCGAGTTCTactgttttttgtattaattactaaaataatgaaattatggGACTGAACACAGTTTTTTAGAGCTTACAGCGAGTTTATAGACGTATAACGAGACCATTtagcgtatatatatataggatttCCTTTCAACCTTTACTCTGATTATGATTTTATTACTCTGTGCtctatgtgtttttgtgtgtttggcaATATTTTATATACCGTACCATCTGTTCCCATTCACTATATATTCACTATACACTCACTATAGATTCACTACACTGATAATTAATCCCTTCTGTTATTTCTCCATTGTatgaaaaactgcagcaaagTTCCCAAATATCAAATTGACAATCcaaaagtagttaaaattaatatatttctgcataaatattgtgtttggctcaattaatattaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20398 True 1231 lncRNA 0.37 2 32912229 32913561

Neighbor

gene id symbol gene type direction distance location
slc16a2 slc16a2,LOC107731360,LOC107758472,LOC107552352,LOC108279893 coding upstream 5997 32877713 ~ 32906232 (+)
thegl NA coding upstream 102895 32801334 ~ 32809334 (+)
arl9 arl9,LOC107552351,LOC107729322,LOC107731368,LOC107662170 coding upstream 113342 32795318 ~ 32798887 (+)
srp72 srp72,LOC107662169,LOC107552350,LOC107731365 coding upstream 117873 32784186 ~ 32794356 (+)
LOC103039461 LOC108277608,LOC108432448 coding upstream 216768 32660879 ~ 32695461 (+)
ints10 ints10 coding downstream 31138 32944699 ~ 32955288 (+)
LOC103038530 NA coding downstream 51351 32964912 ~ 32973457 (+)
LOC103027883 ube2kb,ube2k,LOC108261162,LOC107750257,LOC107559588,LOC107684862,LOC107676795,LOC100708886 coding downstream 60836 32974397 ~ 32982157 (+)
LOC103034989 LOC108434520 coding downstream 75563 32989124 ~ 32992710 (+)
LOC103027667 NA coding downstream 83001 32996562 ~ 33032010 (+)
G15162 NA non-coding upstream 88 32897426 ~ 32912141 (+)
G15163 NA non-coding upstream 1272 32900452 ~ 32910957 (+)
G15141 NA non-coding upstream 70726 32822574 ~ 32841503 (+)
G15130 NA non-coding upstream 77025 32764220 ~ 32835204 (+)
G15125 NA non-coding upstream 146023 32747931 ~ 32766206 (+)
G15169 NA non-coding downstream 13021 32926582 ~ 32983383 (+)
G15194 NA non-coding downstream 161880 33075441 ~ 33096870 (+)
G15197 NA non-coding downstream 167495 33081056 ~ 33084299 (+)
G15328 NA non-coding downstream 302851 33216412 ~ 33216648 (+)
G15331 NA non-coding downstream 385100 33298661 ~ 33357837 (+)
G14985 NA other upstream 733631 32174401 ~ 32178598 (+)
smim13 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766,LOC107669968,LOC107734024 other upstream 867166 32041035 ~ 32045063 (+)
LOC103035097 fam193b other upstream 1734637 31161067 ~ 31177592 (+)
LOC103032125 NA other upstream 2140076 30739044 ~ 30772153 (+)
G14638 rps15a,MGC114789,RPS15A,LOC107686992 other upstream 2643847 30260677 ~ 30268382 (+)
G15160 NA other downstream 7463 32921024 ~ 32924785 (+)
G15170 NA other downstream 109675 33023236 ~ 33066558 (+)
nsg1 LOC108431918 other downstream 1109762 34023323 ~ 34121443 (+)
G15411 mcm7,LOC102777806,LOC107716516,LOC107744067,LOC107665623 other downstream 1306382 34219943 ~ 34228038 (+)

Expression


Co-expression Network