G15407 (tmem128)


Basic Information

Item Value
gene id G15407
gene name tmem128
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 34057811 ~ 34065029 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU20783
attttatttgaaaatagCTCCGCCCACAGGCTACATCAGGTCATTAGTCACTGACTGAGAGAcgtataaaataatttacactGGAATAAAGGAATGTAGAAACACTACGAATATAAAACAGGGAATCCCACGTTATTCCGAAATAACAGTCCGGCCGGCGTTCCCGACTCCGCCCCCTCCGCTCTCCGCCCCCCTGCTGCTCTCCGGCTCCACCAtCTGCAGGAATCTCATCCCAGCAGAGAAATCAGCATCACCACCCCCATAAACTGAGTGAAGAGGATCACTGGAGTCAGGAAGGACCAAACCGGCCACAGAGCGATGTtaaaaCTGCAGGAGGCGGCGATGAAGGCGGCGGTGGTGATCGGAGGGACAGCAGGATATTCCTGATCGTAGTGTTTGATCCCTTTTATCCACTCCAGATAAACGATACAGAACCCGGCCAGACTCACACTCACCCCCAGCAGCACCACACCCACATTAAACCACCAGCTTTTAATATCAGAGTTCTCCAGAATAACGGTGAAGAAATCCACGTAGTAGGTCAGAGCCACGGAGGCCAGGATCCAGAACACGGAGTGCCGGTTAACCCGGGGCAGAGGCTTCACTTCTTTACTCTTCTCGTCCTGCTCGGTAACGGCCTGCAGCAGGAGTTCAGCGTCGTGTTTAAACCGGTTTCTGAGGGAGAGAATCTCGCTGTCCCGCCCCGCGGCCTCCATCTCTCCTCCACCTGCTCCTCCACAATCACAACAACACACtaatactcacactcactcactaacacctcactAACACCATACACTCTACACTTCCTACTGCA
>TU20784
ACTGCACTAATAAGGTGTTTTGTGATTCGTCATGCTGATCCTGGTGGTTTGTTATTGTGAGCTGGGGTGGGAGGTGTAATTCAGACACTGACCTGCAGGAGGCGGCGATGAAGGCGGCGGTGGTGATCGGAGGGACAGCAGGATATTCCTGATCGTAGTGTTTGATCCCTTTTATCCACTCCAGATAAACGATACAGAACCCGGCCAGACTCACACTCACCCCCAGCAGCACCACACCCACATTAAACCACCAGCTTTTAATATCAGAGTTCTCCAGAATAACGGTGAAGAAATCCACGTAGTAGGTCAGAGCCACGGAGGCCAGGATCCAGAACACGGAGTGCCGGTTAACCCGGGGCAGAGGCTTCACTTCTTTACTCTTCTCGTCCTGCTCGGTAACGGCCTGCAGCAGGAGTTCAGCGTCGTGTTTAAACCGGTTTCTGAGGGAGAGAATCTCGCTGTCCCGCCCCGCGGCCTCCATCTCTCCTCCACCTGCTCCTCCACAATCACAACAACACACtaatactcacactcactcactaacacctcactAACACCATACACTCTACACTTCCTACTGCA

Function

symbol description
tmem128 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM128 (transmembrane protein 128).

NR:

description
transmembrane protein 128

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20783 True 817 lncRNA 0.44 5 34057811 34065029
TU20784 False 582 lncRNA 0.41 3 34059767 34065029

Neighbor

gene id symbol gene type direction distance location
slc2a9 slc2a9,LOC107569838 coding upstream 44464 33929204 ~ 34013347 (+)
wdr1 wdr1,LOC106565198,LOC106583413 coding upstream 133807 33909633 ~ 33924004 (+)
LOC103021912 NA coding upstream 158827 33881749 ~ 33898984 (+)
hs3st1 hs3st1 coding upstream 182764 33871315 ~ 33875047 (+)
fat4 fat4,LOC107717300,LOC107694441,LOC106604622 coding upstream 562664 33370578 ~ 33495147 (+)
zbtb49 zbtb49 coding downstream 15514 34080543 ~ 34085529 (+)
msx1 msx1,msx1a,LOC107682425 coding downstream 55387 34120416 ~ 34125886 (+)
stk32b stk32b coding downstream 77150 34142179 ~ 34150568 (+)
evc NA coding downstream 107132 34172161 ~ 34191230 (+)
cops6 cops6 coding downstream 134073 34199102 ~ 34213128 (+)
G15392 NA non-coding upstream 139953 33916898 ~ 33917858 (+)
G15390 NA non-coding upstream 169800 33883776 ~ 33888011 (+)
G15373 NA non-coding upstream 261673 33795798 ~ 33796138 (+)
G15372 NA non-coding upstream 444284 33613279 ~ 33613527 (+)
G15371 NA non-coding upstream 453633 33603952 ~ 33604178 (+)
G15396 NA non-coding downstream 6881 34071910 ~ 34078310 (+)
G15423 NA non-coding downstream 69587 34134616 ~ 34157991 (+)
G15426 NA non-coding downstream 88384 34153413 ~ 34154045 (+)
G15421 NA non-coding downstream 95130 34160159 ~ 34193136 (+)
G15430 NA non-coding downstream 98090 34163119 ~ 34167389 (+)
G15170 NA other upstream 991253 33023236 ~ 33066558 (+)
G15160 NA other upstream 1133026 32921024 ~ 32924785 (+)
G14985 NA other upstream 1879213 32174401 ~ 32178598 (+)
smim13 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766,LOC107669968,LOC107734024 other upstream 2012748 32041035 ~ 32045063 (+)
LOC103035097 fam193b other upstream 2880219 31161067 ~ 31177592 (+)
G15411 mcm7,LOC102777806,LOC107716516,LOC107744067,LOC107665623 other downstream 154914 34219943 ~ 34228038 (+)

Expression


Co-expression Network