G157055


Basic Information

Item Value
gene id G157055
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 8569930 ~ 8570877 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU212948
GAACACAGACGATTGAGATTAGTCCTCCAATATGTTTTCAAGCTAAAAGCCAACCAACGAAACTCGGCATATGCATCTACATTCAGCCCATCATACACTGCACTATATGATGCCAAACCAACCCATATACAACCGCTTGGACTACGTATTCGACAGCAACTAAGGGAACTTGCAGTAGACCTCAAGGATATAGCACAGATGCCTTACAACTCCATTCCACCATGGACCCTCAAAAAACCCAGTGTACTTCTAGACCTCGCCAGTGGAAAGAAATCAGACACCCATCCAAACTTCTATCTTTCAAACAGCATGGACATTAAAGGAAAATTCCCATCCCACCTTTTCATTTACACAGATGGTTCAAAGACTGAAAACAAGGTATCAGCAGCAGTGGTAGCTGGAGAACAGGAACTACGAGTTAGACTTACTTCAACCACTGCTCAATCTTCACAGCCGAAGCCTACGCTCTCTTAATGGCAGTTGACCACGTCATCACCACAAGACAGCAGAAATCCATGATCTGCTCCGACTCCAAATCCTGTTTACAAGCACTGGACAACCTCAACACAGGTCACCCCCTAATCAACACCATTCTGAATAGATTACACAACctttcaaatgaaaatattaatataaaattctgCTGGATACCAGGACATAGTGGCTTCACTGGAAATGAAAAAGCAGACCAGGTAGCAAGAAGAACATCAAAGGCCGAAACAGCGAACTGCAAACTCCCACAAACAGATATAATGCCCCTAATTCACAAATACATCAAAGAGAAGTGGCAAGACGAATGGAAcacccaaacaaacagcaaaCTGTACGAGCTCAACCCCAAAATAGATCATTTTACCAACGCGTATATAGACAATAGATGGGATCAAGTTATTTACTCAAGATGCCGCATTGGCCACACCAGACTGACGCACTCCTTTTTACTGAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212948 True 948 TUCP 0.43 1 8569930 8570877

Neighbor

gene id symbol gene type direction distance location
prpf18 prpf18,LOC107671164,LOC107719961 coding upstream 4432 8555188 ~ 8565498 (+)
cpt1b cpt1b,LOC100329197,LOC107599889,LOC107671150,LOC107686536 coding upstream 36763 8520018 ~ 8533167 (+)
LOC103026556 LOC108264446 coding upstream 56499 8508404 ~ 8513431 (+)
chkb chkb,LOC107577700 coding upstream 62435 8494840 ~ 8507495 (+)
pgc LOC108440932,LOC108441008 coding upstream 95459 8466873 ~ 8474471 (+)
LOC111194761 NA coding downstream 249225 8820102 ~ 8826458 (+)
LOC103043520 NA coding downstream 260552 8831429 ~ 8836613 (+)
LOC103030146 impdh1,impdh1a,LOC108442450,LOC107559456,LOC107665545,LOC107710381,LOC107599814,LOC106561215,LOC103030146 coding downstream 274099 8844976 ~ 8871398 (+)
LOC103031618 NA coding downstream 326700 8897577 ~ 8902959 (+)
rbm28 NA coding downstream 333858 8904735 ~ 8919978 (+)
G157054 NA non-coding upstream 1467 8568244 ~ 8568463 (+)
G157052 NA non-coding upstream 2262 8566429 ~ 8567668 (+)
G157027 NA non-coding upstream 131661 8432614 ~ 8438269 (+)
G157022 NA non-coding upstream 208180 8361520 ~ 8361750 (+)
G157019 NA non-coding upstream 212853 8356218 ~ 8357077 (+)
G157064 frmd4a non-coding downstream 32712 8603589 ~ 8608021 (+)
G157069 NA non-coding downstream 109932 8680809 ~ 8683103 (+)
G157210 NA non-coding downstream 321213 8892090 ~ 8894941 (+)
G157224 NA non-coding downstream 377948 8948825 ~ 8949097 (+)
G157226 NA non-coding downstream 395294 8966171 ~ 8966371 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other upstream 963262 7600567 ~ 7606668 (+)
LOC111194759 NA other upstream 1138362 7372376 ~ 7431568 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other upstream 1398305 7093507 ~ 7171625 (+)
G156188 NA other upstream 3412530 5157154 ~ 5157400 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other upstream 3932640 4575668 ~ 4637290 (+)
G157383 NA other downstream 1369952 9940829 ~ 9941805 (+)
gan gan,LOC107738389,LOC107684660,LOC107722487,LOC107666225 other downstream 2001866 10572743 ~ 10591523 (+)
klhl36 klhl36,LOC107684687,LOC107722460,LOC107666227 other downstream 2129911 10700788 ~ 10713982 (+)
LOC103038570 cs012,zgc:112052,LOC103038570,LOC107666220,LOC108424746,LOC107587048,LOC107683025,LOC103371715 other downstream 2180822 10751699 ~ 10754698 (+)
hipk2 hipk2,LOC107722467 other downstream 2460188 11031065 ~ 11143471 (+)

Expression


Co-expression Network