G176679


Basic Information

Item Value
gene id G176679
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 4033255 ~ 4033487 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU200676
AATTCCCGCATCTCGCCAGGAGATGGCGCCCGCAGCTGAATCAATCATCCATTCATTTTCCAAACCGCGCTGGTCCAGTATAATATCGTACAGGTATAATTTTCTTTTTAATTGATCATTAAATCGTTTAATTAAGGTTTGTACATGCTAGTTTTCATGGCAGAGTTTAACATAAATATTTATTACTACTGGAGCTCACAGTTTGCTACATTTTAAATGATTATTAAACAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200676 True 233 lncRNA 0.36 1 4033255 4033487

Neighbor

gene id symbol gene type direction distance location
CI01000037_03946645_03954021 SIK1 coding upstream 78941 3945995 ~ 3954314 (+)
CI01000037_03901647_03902747 NA coding upstream 130508 3899399 ~ 3902747 (+)
CI01000037_03875808_03891566 NA coding upstream 140868 3875488 ~ 3892387 (+)
CI01000037_03855991_03860283 UBE2A.L, UBE2A, UBE2B, UBE2AL, BRAFLDRAFT_128294 coding upstream 171954 3855991 ~ 3861301 (+)
CI01000037_03824405_03854894 ANKRD10B coding upstream 178061 3824208 ~ 3855194 (+)
CI01000037_04050140_04050646 NA coding downstream 15678 4049165 ~ 4050883 (+)
CI01000037_04061560_04065802 NA coding downstream 28073 4061560 ~ 4066041 (+)
CI01000037_04080145_04081691 NA coding downstream 44994 4078481 ~ 4082806 (+)
CI01000037_04168194_04170478 NA coding downstream 134707 4168194 ~ 4171137 (+)
CI01000037_04175833_04178651 NA coding downstream 142346 4175833 ~ 4178651 (+)
G176673 NA non-coding upstream 12418 4020447 ~ 4020837 (+)
G176672 NA non-coding upstream 13324 4019447 ~ 4019931 (+)
G176519 NA non-coding upstream 23211 3930981 ~ 4010044 (+)
G176652 NA non-coding upstream 117904 3913950 ~ 3915351 (+)
G176649 NA non-coding upstream 123344 3909615 ~ 3909911 (+)
G176680 NA non-coding downstream 1681 4035168 ~ 4035596 (+)
G176689 NA non-coding downstream 17718 4051205 ~ 4051441 (+)
G176690 NA non-coding downstream 18490 4051977 ~ 4052192 (+)
G176691 NA non-coding downstream 18977 4052464 ~ 4052844 (+)
G176377 NA other upstream 945287 2976862 ~ 3087968 (+)
G176346 NA other upstream 1193202 2839760 ~ 2840053 (+)
CI01000037_01965864_01966433 COA5, CB064 other upstream 2062864 1965603 ~ 1966435 (+)
G174949 NA other upstream 2418981 1613876 ~ 1614274 (+)
CI01000037_04213179_04218057 NA other downstream 179796 4212907 ~ 4218305 (+)

Expression


Co-expression Network