CI01000052_02374792_02389760


Basic Information

Item Value
gene id CI01000052_02374792_02389760
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 2374712 ~ 2390103 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000052_02374792_02389760.mRNA
ATATTAATGCACTTGAAGGGCTGGCAGAGGAACAGTGCATTGTGCCATCCTTACACAGGCTCAGGGAGAAAATCATTCTCATGAAAGTCAAGTGCGAGAGCTATTTGCATGGAGAGTGTGTGGTCAGCGATTTCCCCTTCGTCTCTCTGTGGGTCTATCAAGATTGCTGTACTCATGACACTGTTGTCATCTTCCAATGCAGTCTGACCTTGTTGCTGTTTGTTCCCACAGTGTTTGGAGGTTTCTCTGGACAACCAGACCTTGATTCTGCCTTAAGTAGAAAAGAGCTGGTGAGTTCTGGTACAGCTCAGTTCCACGCTGGACCACACAAACTATCTGGAGGAGGACTGGAGAGCATGGGGAAATCAAACAGCAAGCTCAAACCAGAGGTGGTGGAGGACCTGACCAGGAAGACCTACTTTACGGAGAAAGAGGTTCAGCAATGCGAGCAGGAGTGTGTAGTTTGGCACACCTCACTTAACGTCAGTCTGTCACAGAATCCAAGTGCTGGCAATTTTGCTGGCATGCCCAAGGAGCTAATGGACTCATGTGTGCTGGGCATCATAATGAAAGTCTGTATTTGAATATACTGCAATTTACTGAAGTACCGTTTAATGGCTGGTGGAGTGGAATTGCCTTAAGGTGGTGAAGCTTTAGTCAGTAGTCTTGCTAAAAAACAAAACACACACGCACAACCAAGGTCATATGATAGCTTTGTGTGCGGAATAGACTGAAATTTTAGTCAGTATTCACAGATAATCTTCCCCTCTAGTAGGAGGACCAAATCTGCAACCAGATCATTGAGTTAGTGAGTTGAACTTGAGAGAATCTAATTAGTTCAGTTTGTGAAATAAATAATTCAGACTGGTTTTGTGATCTTCAGCAGCAGATTCATTCAAAAGAGTTGACTCACATTTTGCTCACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000052_02374792_02389760.mRNA False 927 mRNA 0.44 5 2374712 2390103

Neighbor

gene id symbol gene type direction distance location
CI01000052_02310477_02312424 LHFPL5B, LHFPL5, LHFPL5A coding upstream 61805 2309879 ~ 2312907 (+)
CI01000052_02182830_02186951 NA coding upstream 187534 2181940 ~ 2187178 (+)
CI01000052_02167466_02172193 ADORA1, ADORA1B coding upstream 201676 2166584 ~ 2173036 (+)
CI01000052_02120654_02122805 NA coding upstream 251452 2120360 ~ 2123260 (+)
CI01000052_02077422_02080093 PROK1 coding upstream 294377 2077422 ~ 2080335 (+)
CI01000052_02397395_02408461 MGC78985, NCS1A, NCS1B, NCS1.L, NCS1 coding downstream 7292 2397395 ~ 2408539 (+)
CI01000052_02417407_02438433 HMCN2 coding downstream 27269 2417372 ~ 2438924 (+)
CI01000052_02439580_02463549 HMCN2 coding downstream 49477 2439580 ~ 2465673 (+)
CI01000052_02468269_02501109 HMCN2 coding downstream 78166 2468269 ~ 2501174 (+)
CI01000052_02591303_02592790 NA coding downstream 198756 2588859 ~ 2592797 (+)
G223843 NA non-coding upstream 13264 2361044 ~ 2361448 (+)
G223834 NA non-coding upstream 47894 2326583 ~ 2326818 (+)
G223807 NA non-coding upstream 54116 2315719 ~ 2320596 (+)
G223829 NA non-coding upstream 76851 2297629 ~ 2297861 (+)
G223828 NA non-coding upstream 79402 2294958 ~ 2295310 (+)
G223806 NA non-coding downstream 21205 2411308 ~ 2414717 (+)
G223808 NA non-coding downstream 25064 2415167 ~ 2415889 (+)
G223858 NA non-coding downstream 119036 2509139 ~ 2509435 (+)
G223863 NA non-coding downstream 126496 2516599 ~ 2516889 (+)
G223864 NA non-coding downstream 127375 2517478 ~ 2518007 (+)
G223694 NA other upstream 270413 2049326 ~ 2104299 (+)
G223545 NA other upstream 1103785 1270492 ~ 1270927 (+)
G224953 NA other downstream 1041033 3431136 ~ 3460136 (+)

Expression


Co-expression Network