Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00000078 |
| length | 1137 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 7 |
| gene id | XLOC_000040 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 1904419 ~ 1911381 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-090313-26 | Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human CD2 (CD2 molecule). |
| ensembl_id | ENSDART00000142874 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00000077 | lncRNA | upstream | 4576 | 1898909 ~ 1899843 (+) | True | XLOC_000039 |
| TCONS_00000073 | lncRNA | upstream | 111896 | 1790772 ~ 1792523 (+) | True | XLOC_000036 |
| TCONS_00000071 | lncRNA | upstream | 172935 | 1730392 ~ 1731484 (+) | False | XLOC_000036 |
| TCONS_00000065 | lncRNA | upstream | 198539 | 1705130 ~ 1705880 (+) | True | XLOC_000035 |
| TCONS_00000064 | lncRNA | upstream | 213394 | 1690047 ~ 1691025 (+) | False | XLOC_000035 |
| TCONS_00003015 | lncRNA | downstream | 90335 | 2001716 ~ 2005632 (+) | True | XLOC_000043 |
| TCONS_00002808 | lncRNA | downstream | 112028 | 2023409 ~ 2023645 (+) | True | XLOC_000044 |
| TCONS_00000101 | lncRNA | downstream | 385210 | 2296591 ~ 2299546 (+) | True | XLOC_000048 |
| TCONS_00003016 | lncRNA | downstream | 1807285 | 3718666 ~ 3720603 (+) | True | XLOC_000053 |
| TCONS_00000113 | lncRNA | downstream | 2686679 | 4598060 ~ 4680477 (+) | True | XLOC_000056 |
| TCONS_00000076 | mRNA | upstream | 4571 | 1896737 ~ 1899848 (+) | False | XLOC_000039 |
| TCONS_00000075 | mRNA | upstream | 54315 | 1838164 ~ 1850104 (+) | True | XLOC_000038 |
| TCONS_00000074 | mRNA | upstream | 88759 | 1805294 ~ 1815660 (+) | True | XLOC_000037 |
| TCONS_00000072 | mRNA | upstream | 107587 | 1789357 ~ 1796832 (+) | False | XLOC_000036 |
| TCONS_00000066 | mRNA | upstream | 172855 | 1712140 ~ 1731564 (+) | False | XLOC_000036 |
| TCONS_00000079 | mRNA | downstream | 4586 | 1915967 ~ 1923253 (+) | True | XLOC_000041 |
| TCONS_00000080 | mRNA | downstream | 29650 | 1941031 ~ 2000357 (+) | True | XLOC_000042 |
| TCONS_00000081 | mRNA | downstream | 113704 | 2025085 ~ 2027100 (+) | True | XLOC_000045 |
| TCONS_00000082 | mRNA | downstream | 190160 | 2101541 ~ 2129631 (+) | False | XLOC_000046 |
| TCONS_00000086 | mRNA | downstream | 190160 | 2101541 ~ 2216362 (+) | False | XLOC_000046 |
| TCONS_00000069 | other | upstream | 111048 | 1718611 ~ 1793371 (+) | False | XLOC_000036 |
| TCONS_00000070 | other | upstream | 172093 | 1719207 ~ 1732326 (+) | False | XLOC_000036 |
| TCONS_00000068 | other | upstream | 181262 | 1717697 ~ 1723157 (+) | False | XLOC_000036 |
| TCONS_00000067 | other | upstream | 185892 | 1712153 ~ 1718527 (+) | False | XLOC_000036 |
| TCONS_00000061 | other | upstream | 328856 | 1575483 ~ 1575563 (+) | True | XLOC_000032 |
| TCONS_00000094 | other | downstream | 279319 | 2190700 ~ 2214397 (+) | False | XLOC_000046 |
| TCONS_00000098 | other | downstream | 360880 | 2272261 ~ 2288773 (+) | False | XLOC_000048 |
| TCONS_00000099 | other | downstream | 364224 | 2275605 ~ 2275742 (+) | True | XLOC_000049 |
| TCONS_00000100 | other | downstream | 375468 | 2286849 ~ 2299546 (+) | False | XLOC_000048 |
| TCONS_00000102 | other | downstream | 390577 | 2301958 ~ 2302623 (+) | False | XLOC_000050 |
