RNA id: TU163966



Basic Information


Item Value
RNA id TU163966
length 270
lncRNA type inter_gene
GC content 0.54
exon number 2
gene id G111021
representative True

Chromosome Information


Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 9599932 ~ 9607073 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


tcctcctgaagtccactatcatctccactgttttgagcgtgttgagctccaagttgttcagactgcaccattcagccagctctttgacctcctgtctgtaagcagactcgtcaccgtcctgtatgaggccgatgactgtggtgtcgtctgcaaacttcaggagtttgacagaggcgtctttagaggtgcagtcattggtgtagagggagaagagcagtggggagaggacacaaccctgaggggctccagtgctggttgtgcgggtgctgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU163945 lncRNA downstream 212541 9386179 ~ 9387391 (-) True G111005
TU163808 lncRNA downstream 408593 9126685 ~ 9191339 (-) False G110897
TU163809 lncRNA downstream 408593 9126685 ~ 9191339 (-) False G110897
TU163810 lncRNA downstream 408593 9187880 ~ 9191339 (-) True G110897
TU163744 lncRNA downstream 568483 9031135 ~ 9031449 (-) True G110852
TU163969 lncRNA upstream 13046 9620119 ~ 9620453 (-) True G111024
TU163971 lncRNA upstream 16627 9623700 ~ 9624119 (-) True G111025
TU163998 lncRNA upstream 67791 9674864 ~ 9676505 (-) True G111045
TU164002 lncRNA upstream 147242 9754315 ~ 9754980 (-) True G111048
TU164072 lncRNA upstream 268319 9875392 ~ 9875664 (-) True G111097
XM_043260592.1 mRNA downstream 75935 9387510 ~ 9523997 (-) False ulk4
XM_043260591.1 mRNA downstream 75935 9387510 ~ 9523997 (-) True ulk4
XM_043260593.1 mRNA downstream 75935 9411383 ~ 9523997 (-) False ulk4
XM_043260449.1 mRNA downstream 277403 9319555 ~ 9322529 (-) True cmtm8b
XM_043261663.1 mRNA downstream 442511 9149115 ~ 9157421 (-) True LOC122360802
XM_043261436.1 mRNA upstream 20173 9627246 ~ 9629046 (-) True ccka
XM_043261087.1 mRNA upstream 71150 9678223 ~ 9702267 (-) True trim71
XM_043261852.1 mRNA upstream 98767 9705840 ~ 9714651 (-) True tcaim
XM_043261435.1 mRNA upstream 171244 9778317 ~ 9787092 (-) True abhd5a
XM_043261431.1 mRNA upstream 211513 9818586 ~ 9858631 (-) False snrka
TU163906 other downstream 327327 9270971 ~ 9272605 (-) True G110974
TU163829 other downstream 447749 9145930 ~ 9152183 (-) True G110911
XR_006252934.1 other downstream 952377 8647414 ~ 8647555 (-) True LOC122361375
TU163623 other downstream 963710 8633350 ~ 8636222 (-) True wu:fj39g12
TU163343 other downstream 1283247 8312265 ~ 8316685 (-) True G110556
TU164366 other upstream 1139720 10746793 ~ 10748300 (-) False LOC122361037
TU164396 other upstream 1254878 10861951 ~ 10883211 (-) False LOC122360812
TU164397 other upstream 1254878 10861951 ~ 10866428 (-) False LOC122360812
TU164545 other upstream 1663591 11270664 ~ 11286432 (-) False G111450
TU164609 other upstream 1803605 11410678 ~ 11411777 (-) True G111490

Expression Profile