RNA id: TU182153


Basic Information

Item Value
RNA id TU182153
length 820
lncRNA type inter_gene
GC content 0.45
exon number 5
gene id G123282
representative False

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 464104 ~ 476401 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGCTCTTAAAATATTGGAATCTGTTTAATGTGCATTGAAACACAGGATTCAGCCTGATACACAGTCAGATCCAGAGAAGACAGTTGATTTCTTCCCTCCGTGAGCTCTCAGAGCAAAACACACCAAAGACCTCAACACGCGCTCTCAATGTGCTGTCACGACATGTCAGCAGAACGCACAAGGTGGAACATGCACATGTGTTTGTTTCAGTCGCTTGGAGACGTCTGATGCACAAATATCAGAGACCTACGACTACGCACTTCACCTATATTCgacaaaaataaagtatgaGATTTCGccaaaaagaagaataaaaatctaaaaggcAAAAACACATCGTCTTTGTTACCTCTATGTTAACTTAATCTAGCTCACGTTCCTTTTCCACTTTTCTACTGAATTCTGACCTATATTCCCcgccCCTCGATCTCATCTCCTATACCACCACCAGCTCGCACACCCACGTACATGTGGAACAGATAAGTCATCATGTCGTCACACTTCATATCCGGCTCGTCTTCATCCTCACTCATGTTGTAGAACTTCCGGAAGAAATTGAAGGCCACCACGGTGTAAAGGTAGACCACCACAGCCAGCAGACCCACCGTCATCACCAGCTTTTGCCATTGTGAGTTACAGAGGACAGGATGGTGCGCAGGGTTTTGACGCCCATAGCGATATCCAGCAGATGACAGGCGAAGAAAAAGTTGTTGTAGTGGCCAAGCAGTGACATGACCAGATACCAAACCAGATACAGGAACGTCTAATGAACACCACTCCAAATTTCCAGATTTGGTATTTGATGTCAATAGATGTTAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU182105 lncRNA upstream 105202 361393 ~ 363036 (+) True G123257
TU182151 lncRNA downstream 2620 474750 ~ 476401 (+) False G123282
TU182176 lncRNA downstream 39168 511298 ~ 512632 (+) True G123301
TU182193 lncRNA downstream 57268 529398 ~ 529619 (+) True G123312
TU182402 lncRNA downstream 378523 850653 ~ 919977 (+) False G123422
TU182403 lncRNA downstream 418640 890770 ~ 919977 (+) True G123422
XM_043264062.1 mRNA upstream 17029 446701 ~ 451209 (+) True c18h19orf54
XM_043264647.1 mRNA downstream 76687 548817 ~ 566665 (+) False rasgrp4
XM_043264643.1 mRNA downstream 76687 548817 ~ 566665 (+) False rasgrp4
XM_043264644.1 mRNA downstream 76688 548818 ~ 566665 (+) True rasgrp4
XM_043264641.1 mRNA downstream 76688 548818 ~ 566665 (+) False rasgrp4
XM_043264646.1 mRNA downstream 76688 548818 ~ 566665 (+) False rasgrp4
TU182087 other upstream 359406 108369 ~ 108832 (+) True G123243
XR_006253182.1 other downstream 342634 814764 ~ 823177 (+) False LOC122362993
XR_006253178.1 other downstream 573081 1045211 ~ 1054735 (+) True tmem123
XR_006253179.1 other downstream 573081 1045211 ~ 1047991 (+) False tmem123
TU182587 other downstream 1093296 1565426 ~ 1571931 (+) True G123568
TU182722 other downstream 1529656 2001786 ~ 2002290 (+) True G123664

Expression Profile