RNA id: TU184110


Basic Information

Item Value
RNA id TU184110
length 420
RNA type TUCP
GC content 0.55
exon number 2
gene id G124661
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 5976210 ~ 5979282 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCGGGGATTACAGCCGACGCTTCACCAACAAATGGCGATTTACGACGATACAATGGGACTAGAAACCTTCATCAACAAAACGATCCGTATTTCCCAACATCTCAATGCCTGTACTACGTCCCGTCCACCGCCAGAGCTGCCTACCTCACCATCACAGAATCCATCCGACGAACCCATGATCACGGACACCTATCATCTCACTCCCTCCGAACGCACCCGCCGACTTGCTACCAACCTGTGCCTGTACTGTGGACAGCCGAATCACCGCCTCAACACCTGTCCTGTCCGACCCCCGCGCCCGACGACCCGGAACATCGGCTGGGATTGAGGTTACCTCCACAAGCTTCTGTCTGCGCTATCTCTAGCGATCTCCTGAGGAATAACCCTTTCTGAAACGGACTTCCTGCACTTGAGTATTCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU184061 lncRNA upstream 315977 5659906 ~ 5660233 (+) True G124622
TU184052 lncRNA upstream 351233 5623906 ~ 5624977 (+) False LOC122323196
TU184043 lncRNA upstream 480566 5495189 ~ 5495644 (+) False LOC122363125
TU184042 lncRNA upstream 482077 5492336 ~ 5494133 (+) False LOC122363125
TU184034 lncRNA upstream 621230 5354713 ~ 5354980 (+) True G124595
TU184121 lncRNA downstream 41959 6021241 ~ 6021636 (+) True G124672
TU184122 lncRNA downstream 44377 6023659 ~ 6023991 (+) True G124673
TU184126 lncRNA downstream 49241 6028523 ~ 6028845 (+) False LOC122362599
TU184162 lncRNA downstream 248199 6227481 ~ 6230584 (+) True G124703
XR_006253138.1 lncRNA downstream 311240 6290522 ~ 6290901 (+) True LOC122362614
XM_043216891.1 mRNA upstream 2395 5970287 ~ 5973815 (+) True LOC122323200
XM_043216888.1 mRNA upstream 18037 5954250 ~ 5958173 (+) True LOC122323197
XM_043216890.1 mRNA upstream 32812 5939951 ~ 5943398 (+) True LOC122323199
XM_043216889.1 mRNA upstream 43892 5928406 ~ 5932318 (+) True LOC122323198
XM_043216892.1 mRNA upstream 51647 5921291 ~ 5924563 (+) True LOC122323201
XM_043216494.1 mRNA downstream 1409 5980691 ~ 5984732 (+) True LOC122322895
XM_043216541.1 mRNA downstream 8252 5987534 ~ 5991345 (+) True LOC122322932
XM_043216603.1 mRNA downstream 18100 5997382 ~ 6000825 (+) True LOC122322990
XM_043264136.1 mRNA downstream 29768 6009050 ~ 6012519 (+) True LOC122362598
XM_043264137.1 mRNA downstream 41267 6020549 ~ 6029121 (+) True LOC122362599
TU184051 other upstream 346557 5623453 ~ 5629653 (+) True G124612
TU184037 other upstream 580898 5394895 ~ 5395312 (+) True G124598
TU184019 other upstream 746264 5228563 ~ 5229946 (+) True G124580
TU184016 other upstream 750153 5225808 ~ 5226057 (+) True G124577
TU183987 other upstream 835539 5139490 ~ 5140671 (+) True G124553
TU184178 other downstream 312209 6291491 ~ 6291925 (+) True G124707
TU184202 other downstream 559965 6539247 ~ 6540907 (+) True G124727
TU184395 other downstream 1047036 7026318 ~ 7027135 (+) True G124881
TU184430 other downstream 1193344 7172626 ~ 7173020 (+) True G124914
TU184436 other downstream 1198557 7177839 ~ 7178276 (+) True G124920

Expression Profile