RNA id: TU184162


Basic Information

Item Value
RNA id TU184162
length 865
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G124703
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 6227481 ~ 6230584 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTCGGTgattcttcgtctggaaaaatcgacttctccgggctgtctgacgggagccgttggaaggacaactcaacgcactgatcaggcctcaagagtgaaaccaggcgacagcatcctgatCAAAGTTATCCTGACCACACCGACTGCAGTTAAGATCGCTGAGAGATCTACGTGGATTCATcaaagccattgcaaactgctaacaccttgggaggacgctgagtaagggtggaagtcggccggtatcaaaacctttggctgctgaagaaatcaactaatccCTTACTCCCAGCTATAGCGCCCCCAATGGGAGCACGTGAGGGCTGGAGAGTTGCTCTAaacctgactgcagcagtgacgtcacactggtggccataagagagacgattaaaggggaactgaaactaattgaattttgactggttcacagaacaacatgaactaaagactcatcttgatttgaacatgtttgtgcatgatctgtgttttaccatgtttaagggcaatgattactaaaatgattagccagacatttctcagttttaccatacttctccaccaagagagaaatggagagttTTGTATCATGTGTGTAGTCtcagctgtgacatggctgagtgctgatgttatgatacaaaaggtacactgataagctacagtagccgtgctgagaacaagaggcaccgttttatttcattcttccttttcagtttattttcacatttcctcctatgttcaagctttaaattttgtattgtatacattatgattaagatgcaagccttacaggtgatcgcccaggTAACATTttgggggtcggttgggaatttttcctcagatactggggttttcgcccaaccttgct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU184126 lncRNA upstream 198636 6028523 ~ 6028845 (+) False LOC122362599
TU184122 lncRNA upstream 203490 6023659 ~ 6023991 (+) True G124673
TU184121 lncRNA upstream 205845 6021241 ~ 6021636 (+) True G124672
TU184061 lncRNA upstream 567248 5659906 ~ 5660233 (+) True G124622
TU184052 lncRNA upstream 602504 5623906 ~ 5624977 (+) False LOC122323196
XR_006253138.1 lncRNA downstream 59938 6290522 ~ 6290901 (+) True LOC122362614
TU184183 lncRNA downstream 65346 6295930 ~ 6296436 (+) True G124711
TU184200 lncRNA downstream 307962 6538546 ~ 6538992 (+) True G124725
TU184229 lncRNA downstream 347241 6577825 ~ 6578301 (+) True G124754
TU184235 lncRNA downstream 459128 6689712 ~ 6691401 (+) True G124760
XM_043264142.1 mRNA upstream 63615 6160559 ~ 6163866 (+) True LOC122362605
XM_043264137.1 mRNA upstream 198360 6020549 ~ 6029121 (+) True LOC122362599
XM_043264136.1 mRNA upstream 214962 6009050 ~ 6012519 (+) True LOC122362598
XM_043216603.1 mRNA upstream 226656 5997382 ~ 6000825 (+) True LOC122322990
XM_043216541.1 mRNA upstream 236136 5987534 ~ 5991345 (+) True LOC122322932
XM_043216906.1 mRNA downstream 332342 6562926 ~ 6566609 (+) True LOC122323214
XM_043216904.1 mRNA downstream 338375 6568959 ~ 6572553 (+) True LOC122323211
XM_043263886.1 mRNA downstream 494246 6724830 ~ 6734282 (+) True LOC122362447
XM_043264225.1 mRNA downstream 506491 6737075 ~ 6759776 (+) True dhx36
XM_043264223.1 mRNA downstream 570844 6801428 ~ 6804684 (+) True LOC122362675
TU184110 other upstream 248199 5976210 ~ 5979282 (+) True G124661
TU184051 other upstream 597828 5623453 ~ 5629653 (+) True G124612
TU184037 other upstream 832169 5394895 ~ 5395312 (+) True G124598
TU184019 other upstream 997535 5228563 ~ 5229946 (+) True G124580
TU184016 other upstream 1001424 5225808 ~ 5226057 (+) True G124577
TU184178 other downstream 60907 6291491 ~ 6291925 (+) True G124707
TU184202 other downstream 308663 6539247 ~ 6540907 (+) True G124727
TU184395 other downstream 795734 7026318 ~ 7027135 (+) True G124881
TU184430 other downstream 942042 7172626 ~ 7173020 (+) True G124914
TU184436 other downstream 947255 7177839 ~ 7178276 (+) True G124920

Expression Profile