RNA id: TU184178



Basic Information


Item Value
RNA id TU184178
length 435
RNA type TUCP
GC content 0.69
exon number 1
gene id G124707
representative True

Chromosome Information


Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 6291491 ~ 6291925 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCCCAGGGGTTCTTTGACTGGGCGTTCCAACCACGCCGACCGGCCCGGGCTCAAGTCGCCGAGCTCACCCGACTGGCCCAACATTGGCTACTGGATCAGGACCCGACCCCCGGCCAGATCGTCGAGAGGGTGGTCATCGACCGGCTCTTGCGGGCTCTTCCCCGAACCTACCGCCAGGCGGTCGGCATGCGCAATCCCCGGACGTCCTCAGAGTTAGTGGAAGCGGTCGAGCTGGCTGAAGCGGCACTCAAGAGGGAAGCCGGGGAGCGAGCGCCACCTTTTCCCCGGAGGGCACCCCAGGAGCAGcgcgcgccggagggcaccTGGCGGCCAGTAGAGCGGGCGGCGGGCCCTGCAGTAAAGGACGAGCCCATGCCCACAGAAACTTCTACCACCCCAGCTTGGGGCCCCCAGGCCTGGCTAGCGGGCTGTGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006253138.1 lncRNA upstream 590 6290522 ~ 6290901 (+) True LOC122362614
TU184162 lncRNA upstream 60907 6227481 ~ 6230584 (+) True G124703
TU184126 lncRNA upstream 262646 6028523 ~ 6028845 (+) False LOC122362599
TU184122 lncRNA upstream 267500 6023659 ~ 6023991 (+) True G124673
TU184121 lncRNA upstream 269855 6021241 ~ 6021636 (+) True G124672
TU184183 lncRNA downstream 4005 6295930 ~ 6296436 (+) True G124711
TU184200 lncRNA downstream 246621 6538546 ~ 6538992 (+) True G124725
TU184229 lncRNA downstream 285900 6577825 ~ 6578301 (+) True G124754
TU184235 lncRNA downstream 397787 6689712 ~ 6691401 (+) True G124760
XR_006253150.1 lncRNA downstream 465779 6757704 ~ 6758458 (+) True LOC122362680
XM_043264142.1 mRNA upstream 127625 6160559 ~ 6163866 (+) True LOC122362605
XM_043264137.1 mRNA upstream 262370 6020549 ~ 6029121 (+) True LOC122362599
XM_043264136.1 mRNA upstream 278972 6009050 ~ 6012519 (+) True LOC122362598
XM_043216603.1 mRNA upstream 290666 5997382 ~ 6000825 (+) True LOC122322990
XM_043216541.1 mRNA upstream 300146 5987534 ~ 5991345 (+) True LOC122322932
XM_043216906.1 mRNA downstream 271001 6562926 ~ 6566609 (+) True LOC122323214
XM_043216904.1 mRNA downstream 277034 6568959 ~ 6572553 (+) True LOC122323211
XM_043263886.1 mRNA downstream 432905 6724830 ~ 6734282 (+) True LOC122362447
XM_043264225.1 mRNA downstream 445150 6737075 ~ 6759776 (+) True dhx36
XM_043264223.1 mRNA downstream 509503 6801428 ~ 6804684 (+) True LOC122362675
TU184110 other upstream 312209 5976210 ~ 5979282 (+) True G124661
TU184051 other upstream 661838 5623453 ~ 5629653 (+) True G124612
TU184037 other upstream 896179 5394895 ~ 5395312 (+) True G124598
TU184019 other upstream 1061545 5228563 ~ 5229946 (+) True G124580
TU184016 other upstream 1065434 5225808 ~ 5226057 (+) True G124577
TU184202 other downstream 247322 6539247 ~ 6540907 (+) True G124727
TU184395 other downstream 734393 7026318 ~ 7027135 (+) True G124881
TU184430 other downstream 880701 7172626 ~ 7173020 (+) True G124914
TU184436 other downstream 885914 7177839 ~ 7178276 (+) True G124920
TU184604 other downstream 1884428 8176353 ~ 8536948 (+) True G125041

Expression Profile