RNA id: TU184270


Basic Information

Item Value
RNA id TU184270
length 1205
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G124783
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 6760783 ~ 6766466 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CATTTTAACAATGTGATAAACTTAAgtattgctgaaaaaaaacgaCAAACCGCTTTGATAAGTATCGCGGAGAGTTATAAAAGATCTCTTTAGAGCAGAATaaaattttcacaaataaaacgGCCTGCTTTCAACtgtcttttgtatatttaatggCCATTAAAAGATTCACAGGGCCTTTGAAGCCTTATCCCATGAGCCCTGGCCTTTCAACATGAAAGCCAGCCAACAAGAAACAGCCAGAATGAGGCCACTGCTTGACCCTCTGACCAGCGCCATCAAAACTGAGACCTTCAGCTAAGCCTCGCATTAAAACACATCCCTGTGGTTATGAGACTACCCGCTTCTGGGGCAATAATCATAATACGTCAAAAAtccgactttttttttttttttttttttttttttactttaacacgAGCAGCAAAAGGTCGGATTTGTTTAGAGAACTTTGGAAAATAGAATATGGCAGGTATTTACCAAGTACCaagcataaatgtatttttttccaggtATTCCTGGAAACCAAACTAAATTCTGATCAAATCATAAGCAAAAAtcgaactgatttttttttatgttggtgTGAGCAGTCCTTTAGAGGGAAAAAGTAGGATGTTCTTACCGTCTACTGTCTGTGACACTAACACCACATCAGCCACCTGTAGAGAGAGCTCATCCGGCTGCCTGGACGTGTACGTCCTTGTCATCTCGACCTGCAGGGTATCTAAcgaaggaaaaaataaattaatataaccGCCTAgaacataaaaatacttttgaatcattttattatccACAAAAGTCATAACCTTACAACAAAACTGCACCTCAACCTGCAGCATGGTTCATGAATTATATGggtttaatcatttaaaaagtagtgTCGCTGCAATACGCTTCATGGCCAGAAGGTGGTGCTGTTTCGCCGAGGCTGGTTGTACTCACTCGTTCTGTCATTCTTGTCGTTAGTGTTGTTCTGCCCCAGAGCGCTGATCCAGCGAGCTCCACCCCCAAGATCATGGTGACTTTGTCTCCAGAGTGGTTGCTGCGGAATCTGATCTGGAACAGGTGGCTGGCGATGTTCTGCCGTGACGTCAGCATTCCCGCAGTGCTACGGACTGGAGAGAGATTCAGGTCTTCTGCTTGACATGACCCCACATATATCTGGTCTCTCAGCGCATAGTCTATAACCGTATAACTCt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006253150.1 lncRNA upstream 2325 6757704 ~ 6758458 (+) True LOC122362680
TU184235 lncRNA upstream 69382 6689712 ~ 6691401 (+) True G124760
TU184229 lncRNA upstream 182482 6577825 ~ 6578301 (+) True G124754
TU184200 lncRNA upstream 221791 6538546 ~ 6538992 (+) True G124725
TU184183 lncRNA upstream 464347 6295930 ~ 6296436 (+) True G124711
TU184281 lncRNA downstream 39017 6805483 ~ 6805688 (+) True G124793
TU184283 lncRNA downstream 47858 6814324 ~ 6814635 (+) True G124795
TU184287 lncRNA downstream 70234 6836700 ~ 6836922 (+) True G124799
TU184377 lncRNA downstream 161158 6927624 ~ 6927950 (+) True G124866
TU184378 lncRNA downstream 161861 6928327 ~ 6928540 (+) True G124867
XM_043264225.1 mRNA upstream 1007 6737075 ~ 6759776 (+) True dhx36
XM_043263886.1 mRNA upstream 26501 6724830 ~ 6734282 (+) True LOC122362447
XM_043216904.1 mRNA upstream 188230 6568959 ~ 6572553 (+) True LOC122323211
XM_043216906.1 mRNA upstream 194174 6562926 ~ 6566609 (+) True LOC122323214
XM_043264142.1 mRNA upstream 596917 6160559 ~ 6163866 (+) True LOC122362605
XM_043264223.1 mRNA downstream 34962 6801428 ~ 6804684 (+) True LOC122362675
XM_043216569.1 mRNA downstream 51103 6817569 ~ 6829622 (+) False cd151l
XM_043216570.1 mRNA downstream 51390 6817856 ~ 6828280 (+) True cd151l
XM_043216568.1 mRNA downstream 51448 6817914 ~ 6829622 (+) False cd151l
XM_043264118.1 mRNA downstream 65304 6831770 ~ 6834563 (+) False uraha
TU184202 other upstream 219876 6539247 ~ 6540907 (+) True G124727
TU184178 other upstream 468858 6291491 ~ 6291925 (+) True G124707
TU184110 other upstream 781501 5976210 ~ 5979282 (+) True G124661
TU184051 other upstream 1131130 5623453 ~ 5629653 (+) True G124612
TU184037 other upstream 1365471 5394895 ~ 5395312 (+) True G124598
TU184395 other downstream 259852 7026318 ~ 7027135 (+) True G124881
TU184430 other downstream 406160 7172626 ~ 7173020 (+) True G124914
TU184436 other downstream 411373 7177839 ~ 7178276 (+) True G124920
TU184604 other downstream 1409887 8176353 ~ 8536948 (+) True G125041
TU184804 other downstream 2592970 9359436 ~ 9365488 (+) True G125192

Expression Profile