RNA id: TU184803


Basic Information

Item Value
RNA id TU184803
length 264
lncRNA type inter_gene
GC content 0.66
exon number 1
gene id G125191
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 9351635 ~ 9351898 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

attggacaggtctggcagcgtgtgacgaggcacgcCTGAAGTGGATCGAACCTCGTCACTGGCGAAGTCTGCACAcgtgtaccgctgacgggccaggatgccggaCTGTTTAACCCTTCTGACTGCCGCCCGGAAGAAGCGAAGGAGAAGCCgcgggaagaagccgccgcccctcgcgcccctgaccagagaggggagcgcgtgcggcccccagactccgccccttacctggacccttccccctggaacactacccgacctgca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU184635 lncRNA upstream 624871 8722507 ~ 8726764 (+) True G125067
TU184632 lncRNA upstream 710188 8641229 ~ 8641447 (+) True G125065
TU184630 lncRNA upstream 711681 8638849 ~ 8639954 (+) True G125063
TU184627 lncRNA upstream 799117 8552004 ~ 8552518 (+) True G125060
TU184625 lncRNA upstream 800915 8549767 ~ 8550720 (+) True G125058
TU184824 lncRNA downstream 67651 9419549 ~ 9512242 (+) False G125194
TU184828 lncRNA downstream 67651 9419549 ~ 9512242 (+) False G125194
TU184830 lncRNA downstream 67651 9419549 ~ 9512242 (+) True G125194
TU184883 lncRNA downstream 342305 9694203 ~ 9695683 (+) True G125236
TU184908 lncRNA downstream 434362 9786260 ~ 9788103 (+) False G125243
XM_043264299.1 mRNA upstream 342586 8999349 ~ 9009049 (+) True LOC122362732
XM_043264298.1 mRNA upstream 545610 8802983 ~ 8806025 (+) True LOC122362731
XM_043263989.1 mRNA upstream 803927 8544699 ~ 8547708 (+) False LOC122362511
XM_043263990.1 mRNA upstream 803927 8544699 ~ 8547708 (+) True LOC122362511
XM_043263991.1 mRNA upstream 803927 8544699 ~ 8547708 (+) False LOC122362511
XM_043216606.1 mRNA downstream 203154 9555052 ~ 9564247 (+) True iqcg
XM_043216607.1 mRNA downstream 203154 9555052 ~ 9564247 (+) False iqcg
XM_043263914.1 mRNA downstream 344325 9696223 ~ 9702146 (+) True onecut1
XM_043263915.1 mRNA downstream 344325 9696223 ~ 9702146 (+) False onecut1
XM_043264262.1 mRNA downstream 357306 9709204 ~ 9739406 (+) True fam214a
TU184604 other upstream 814687 8176353 ~ 8536948 (+) True G125041
TU184436 other upstream 2173359 7177839 ~ 7178276 (+) True G124920
TU184430 other upstream 2178615 7172626 ~ 7173020 (+) True G124914
TU184395 other upstream 2324500 7026318 ~ 7027135 (+) True G124881
TU184202 other upstream 2810728 6539247 ~ 6540907 (+) True G124727
TU184804 other downstream 7538 9359436 ~ 9365488 (+) True G125192
TU185257 other downstream 1473076 10824974 ~ 10837276 (+) False G125461
TU185261 other downstream 1473076 10824974 ~ 10837276 (+) True G125461
TU185314 other downstream 1616187 10968085 ~ 10969767 (+) True G125496
XR_006253172.1 other downstream 1874217 11226115 ~ 11231714 (+) False ccnl1a

Expression Profile