RNA id: TU185741


Basic Information

Item Value
RNA id TU185741
length 245
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G125784
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 12641192 ~ 12641436 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTTAGCCGTTAAACATCACATGTTGTACCTTGATGTTGCGTCCGTCAGAGTTTATCTCAGACCAGCTAGAAACACACTTGCCTGGAAGTTTCTAGTCAGTCTAAACACCCTGAATAGCTGGTTCAGTTGGGTTAATTATGGTTGGAGCCAAACCCTGCAAACCTCCTGCAACAAGTTTGGACACTTGGGGTCGTCAAACTTGATCCTGAAGGGCCgatgtcctgcagagtttagctctgaCTTGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU185740 lncRNA upstream 4809 12636156 ~ 12636383 (+) True G125783
TU185704 lncRNA upstream 51248 12579725 ~ 12589944 (+) True G125760
TU185696 lncRNA upstream 228947 12411865 ~ 12412245 (+) True G125753
TU185692 lncRNA upstream 246460 12393511 ~ 12394732 (+) True G125750
TU185651 lncRNA upstream 601748 12038945 ~ 12039444 (+) True G125714
TU185840 lncRNA downstream 368438 13009874 ~ 13012900 (+) True G125855
TU185872 lncRNA downstream 575078 13216514 ~ 13218281 (+) False LOC122362547
TU185885 lncRNA downstream 696318 13337754 ~ 13339066 (+) True G125877
TU185887 lncRNA downstream 705242 13346678 ~ 13346937 (+) True G125879
TU185889 lncRNA downstream 709055 13350491 ~ 13351730 (+) True G125881
XM_043264215.1 mRNA upstream 45803 12592067 ~ 12595389 (+) True LOC122362670
XM_043264732.1 mRNA upstream 261940 12189466 ~ 12379252 (+) False nectin1b
XM_043216591.1 mRNA downstream 212724 12854160 ~ 12867723 (+) False st14a
XM_043216589.1 mRNA downstream 212725 12854161 ~ 12867723 (+) False st14a
XM_043216587.1 mRNA downstream 212753 12854189 ~ 12867723 (+) True st14a
XM_043216590.1 mRNA downstream 212753 12854189 ~ 12867723 (+) False st14a
XM_043265099.1 mRNA downstream 226605 12868041 ~ 12875690 (+) True dhx34
XR_006246968.1 other upstream 1404045 11234331 ~ 11237147 (+) False selenot1b
TU185364 other upstream 1404051 11234349 ~ 11237141 (+) False selenot1b
XR_006253172.1 other upstream 1409478 11226115 ~ 11231714 (+) False ccnl1a
TU185314 other upstream 1671425 10968085 ~ 10969767 (+) True G125496
TU185257 other upstream 1803916 10824974 ~ 10837276 (+) False G125461
TU185801 other downstream 168014 12809450 ~ 12822781 (+) True G125830
TU185810 other downstream 239152 12880588 ~ 12884612 (+) True G125836
XR_006246942.1 other downstream 275790 12917226 ~ 12925468 (+) False napab
XR_006246961.1 other downstream 305405 12946841 ~ 12955945 (+) False glb1l2
XR_006253128.1 other downstream 575048 13216484 ~ 13218337 (+) False LOC122362547

Expression Profile