RNA id: TU186318



Basic Information


Item Value
RNA id TU186318
length 317
lncRNA type sense_over
GC content 0.63
exon number 2
gene id lbhl
representative False

Chromosome Information


Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 13861871 ~ 13869332 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGTAAAGACAGCAAAGCAAGTCAACGAGGGAAATGACCGCTTGACGCTCTGTGACATTTCGTATCTGTTTGCATCCGCCGCTGACCCGGAGCCACAGGCCTTCACCGGTCACCGCACTCTCAGGCGGCGCGCTGGACGGACGGTGTCCCCCGATGGGGCCGGTGGAGGGGCAGTGCTGCGGGAGCTGCCCCTCTCTGCCCCCTATCATCATACCCGGCGTGGGCGGCGTGGAGCTCTGCAGCACCCAAGAGGACGGATGCCTTCCCACAGACGGAGATATGGGGTACCAAGAAGCCCAGGCCATGGACGAGTATCCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU186286 lncRNA upstream 21805 13809279 ~ 13840132 (+) True G126139
TU186247 lncRNA upstream 155823 13670289 ~ 13706114 (+) False daw1
XR_006246952.1 lncRNA upstream 169379 13632076 ~ 13692558 (+) True LOC122323141
TU186339 lncRNA downstream 49099 13915738 ~ 13917760 (+) True G126178
TU186344 lncRNA downstream 55207 13921846 ~ 13922131 (+) True G126183
TU186345 lncRNA downstream 55518 13922157 ~ 13922424 (+) True G126184
TU186346 lncRNA downstream 56196 13922835 ~ 13923229 (+) True G126185
TU186347 lncRNA downstream 58990 13925629 ~ 13925860 (+) True G126186
XM_043216801.1 mRNA upstream 157210 13695123 ~ 13704727 (+) True daw1
XM_043216803.1 mRNA upstream 264723 13594302 ~ 13597214 (+) True sertad3
XM_043216805.1 mRNA upstream 267788 13591816 ~ 13594149 (+) True blvrb
XM_043216806.1 mRNA upstream 267788 13591939 ~ 13594149 (+) False blvrb
XM_043263910.1 mRNA upstream 336631 13519067 ~ 13525306 (+) True mmp23bb
XM_043216855.1 mRNA downstream 3390 13870029 ~ 13873265 (+) True LOC122323172
XM_043264016.1 mRNA downstream 256757 14123396 ~ 14126844 (+) True rbm7
XM_043263900.1 mRNA downstream 263860 14130499 ~ 14147187 (+) True barx2
XM_043216498.1 mRNA downstream 711531 14578170 ~ 14583254 (+) True smtla
XM_043264916.1 mRNA downstream 837521 14704160 ~ 14727887 (+) True fli1
TU186277 other upstream 179366 13679045 ~ 13682571 (+) True G126132
TU185911 other upstream 431172 13427097 ~ 13430765 (+) False rpl35a
XR_006253129.1 other upstream 643591 13216657 ~ 13218346 (+) False LOC122362547
XR_006253128.1 other upstream 643600 13216484 ~ 13218337 (+) False LOC122362547
XR_006246961.1 other upstream 905992 12946841 ~ 12955945 (+) False glb1l2
TU186336 other downstream 42925 13909564 ~ 13912800 (+) True G126175
TU186297 other downstream 73456 13940095 ~ 13941369 (+) True G126146
TU186575 other downstream 960242 14826881 ~ 14828292 (+) True gemin7
TU186588 other downstream 1040628 14907267 ~ 14908483 (+) False LOC122322993
TU186589 other downstream 1042559 14909198 ~ 14909676 (+) False LOC122322993

Expression Profile