RNA id: XM_043264096.1



Basic Information


Item Value
RNA id XM_043264096.1
length 790
RNA type mRNA
GC content 0.54
exon number 2
gene id gemin7
representative False

Chromosome Information


Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 14826788 ~ 14828292 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


atctCCTTGCTGTCGCTTTTAAGAAATATAACTCGTCTCTGCCGAATGACTTCTTTTTTATATCTCGCTTGATGACTTTAATTTTGAAACGAAACGCTCTTCCGGCCGGAAGTTCAGATGCGCTCGCGTCGAACGAGCAGGCGGTATGAAGACCCCAGTGAGCGTCCTGCGGCTGCCCAGGGGACCGGAGCCCAACAGCCGGGGGTTCGACCCCAGCTCTCCCCGCTTCATCGCTCtgtgctcctcctcctcctcctcctcctgtgaTGAAGAGGAGCAGCGCCTGCGCTCGGAGCTCCGCCAGAGGTTTCTGTGGACTCTCTCGCTGATGACGGACAGGTCGGTCCGGTTCGACATGCACGAGCGCGTGCGCGTGCGCGCCAGGTTCGGCGCCTCGGACATCGACGTGCTCCGCTTCCAGGTGTCTGACCTGGAGACTCCCCTCGGGGTCCAGAGGGAGGCGCTCCTGAGGAGCCAGGACGTGGTCGCGTGCTCGTTTGAACCGTGAGCGCCGTCCCGATCCTCGCCGCGAGAGCGCGCCACGAGAGCTGCCGTCAGAGTGTCGAAGACCTTTCTCGTTGTTGTTTGTAATAAACCTTTGCTGAGAACtgtgtttggatttttttttttttccccactgtaagaaccttttgtgcaatggaaagttAAAGGTTGTTCATCGATGCCCCTTCATTTCTAAGTATCTGTAGCCTGCCTACTGATAATTAAACTAATCGTAATCAAACGGCATATGAGTTACATAAAAAATTGCACAATAAATGCCTTGCAa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006246940.1 lncRNA upstream 83344 14740786 ~ 14743444 (+) True LOC122323060
TU186500 lncRNA upstream 355773 14470760 ~ 14471015 (+) True G126285
TU186468 lncRNA upstream 384285 14375565 ~ 14442503 (+) True G126262
TU186455 lncRNA upstream 705938 14120193 ~ 14120850 (+) True G126251
TU186447 lncRNA upstream 757917 14068604 ~ 14068871 (+) True G126243
TU186590 lncRNA downstream 82151 14909829 ~ 14910157 (+) False LOC122322993
TU186586 lncRNA downstream 104643 14932321 ~ 14984748 (+) True G126347
TU186584 lncRNA downstream 109247 14936925 ~ 14937634 (+) True G126345
TU186722 lncRNA downstream 207705 15035383 ~ 15047877 (+) False LOC122362588
TU186725 lncRNA downstream 238668 15066346 ~ 15066577 (+) True G126458
XM_043263957.1 mRNA upstream 51395 14752182 ~ 14775393 (+) True kcnj5
XM_043264916.1 mRNA upstream 98901 14704160 ~ 14727887 (+) True fli1
XM_043216498.1 mRNA upstream 243534 14578170 ~ 14583254 (+) True smtla
XM_043263900.1 mRNA upstream 679601 14130499 ~ 14147187 (+) True barx2
XM_043264016.1 mRNA upstream 699944 14123396 ~ 14126844 (+) True rbm7
XM_043216812.1 mRNA downstream 15533 14843211 ~ 14850376 (+) True bmp16
XM_043264627.1 mRNA downstream 44090 14871768 ~ 14901407 (+) True ppp1r37
XM_043216605.1 mRNA downstream 78938 14906616 ~ 14910141 (+) True LOC122322993
XM_043264968.1 mRNA downstream 83366 14911044 ~ 14921023 (+) True shkbp1
XM_043264969.1 mRNA downstream 83469 14911147 ~ 14921023 (+) False shkbp1
TU186297 other upstream 885419 13940095 ~ 13941369 (+) True G126146
TU186336 other upstream 913988 13909564 ~ 13912800 (+) True G126175
TU186277 other upstream 1144217 13679045 ~ 13682571 (+) True G126132
TU185911 other upstream 1396023 13427097 ~ 13430765 (+) False rpl35a
XR_006253129.1 other upstream 1608442 13216657 ~ 13218346 (+) False LOC122362547
TU186588 other downstream 79589 14907267 ~ 14908483 (+) False LOC122322993
TU186589 other downstream 81520 14909198 ~ 14909676 (+) False LOC122322993
TU186953 other downstream 1124341 15952019 ~ 15953653 (+) False LOC122362954
TU187042 other downstream 1225200 16052878 ~ 16055627 (+) False LOC122362745
TU187043 other downstream 1225451 16053129 ~ 16055627 (+) False LOC122362745

Expression Profile