RNA id: XM_043263997.1


Basic Information

Item Value
RNA id XM_043263997.1
length 1185
RNA type mRNA
GC content 0.49
exon number 5
gene id glipr1b
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 20545992 ~ 20549357 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTGTAccgagaaagacagacagacaaacacagaaagagagggagagatagagAGTGGGCAAATCCACGGCACCATGACGCACGGGTCAGCGCGTCTCCTGCAGTGATGCTCCATTGACTCATTTATCCAGAGCGAAGCAGCAGCTCGGCTCAGGACGGTCTCCTGCCATGGACTCTCTCGGCGGTCTCCTCTTGCGGATATCGGTGCTTCTGTACGGCTCCTGCGGCGTTCTGGCGCTCCTCCCGGGAATCACGGAGCCCGAGTTCATCCGCAGGTGTGTGCTGGCGCATAACACGCAGCGCTCGCGCATCGTTCCACCTGTGGCCAGCGCGCGCTCAATGTCCTGGGACAAAGAACTGGCCAAAGGTGCCAGAGACCGAGCGAGACACTGCAGGGCCTCTCATCACCCTGGGCTGGCACACTTCGGGCACCCGCTGTTCGGGTGGATGGGCGAGAACATCTGGCTGGGGGCTCCGTTTTCAGCCTTCTCCGTGGAGAACGCCATACACAGATGGAGCAAAGAAGGAGCTTACTCGCTCAAAAATAACAACTGCTCACGCATGTGTGGCCACTACGCACAGTTAATGTGGTCTACGAGCTTCAAGCTGGGCTGTGCTGTAAACGTGTGCTCGAAAGGCATCGAAAACTTCTCTTCTCACCCGGAATCCACTATTTTTGTGTGCAACTACGGCGATACGGGACACGTTCATGGTGTTACTCCATACATAGCAGGTGTGGCGTGCAGCGGTTGTGGGTCAGAGACTTGCAGAGACAACGTCTGTAGATATGATTGGTTCCCTGGGTGGGACTATGGCCCGCCCTCTTCAGCCTACAGTATTTCCCACTGGCTGACTAATCTTGGACTGTATCTACTAGGAGTTTGCTGGCTACTCCACTTTTATGCAACACATTAATGTGATTCTGTGAACCCGTTCCCTAACGTCTCAAACTTGAACCTTAAAATTTGCATCTCTCCATAATTTCGGTATGGTTGGATATTAAATTAGCAatcactgaaataataataagaaatctgtctataaatatacatgtatatttttcttttctgctgtgtgtaaatcatttatttacttagttCCATAGGcctgtaaatgcatttagaaaaagaGAATTGGCATCATAAAAGTGCTAGTTGAATAAACTTATTGATATTTTATACTCTTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU188708 lncRNA upstream 162234 20325330 ~ 20383758 (+) True G127785
TU188734 lncRNA upstream 170157 20373854 ~ 20375835 (+) True G127800
TU188698 lncRNA upstream 264697 20256712 ~ 20281295 (+) True G127780
XR_006253191.1 lncRNA upstream 321408 20221304 ~ 20224584 (+) True LOC122363139
TU188681 lncRNA upstream 330761 20202748 ~ 20215231 (+) False G127766
TU188810 lncRNA downstream 12726 20562083 ~ 20572310 (+) True G127860
TU188825 lncRNA downstream 36694 20586051 ~ 20588863 (+) True G127873
TU188827 lncRNA downstream 47850 20597207 ~ 20600519 (+) False terb1
TU188764 lncRNA downstream 90659 20640016 ~ 20641059 (+) False LOC122362661
XR_006253183.1 lncRNA downstream 92408 20641765 ~ 20647639 (+) True LOC122363025
XM_043264099.1 mRNA upstream 7374 20532906 ~ 20538618 (+) True cers3b
XM_043216714.1 mRNA upstream 14413 20506031 ~ 20531579 (+) True LOC122323072
XM_043216717.1 mRNA upstream 14413 20506031 ~ 20531579 (+) False LOC122323072
XM_043216716.1 mRNA upstream 14413 20506031 ~ 20531579 (+) False LOC122323072
XM_043216718.1 mRNA upstream 14413 20506031 ~ 20531579 (+) False LOC122323072
XM_043216579.1 mRNA downstream 1791 20551148 ~ 20556627 (+) False si:dkey-30c15.17
XM_043216582.1 mRNA downstream 1801 20551158 ~ 20556627 (+) False si:dkey-30c15.17
XM_043216580.1 mRNA downstream 1816 20551173 ~ 20556627 (+) True si:dkey-30c15.17
XM_043264151.1 mRNA downstream 12478 20561835 ~ 20565306 (+) True syt1b
XM_043264892.1 mRNA downstream 40327 20589684 ~ 20598619 (+) True terb1
TU188630 other upstream 458411 20086695 ~ 20087581 (+) False zfhx3a
XR_006246956.1 other upstream 532206 20003004 ~ 20013786 (+) False wdr59
TU188266 other upstream 1704457 18777768 ~ 18841535 (+) False G127500
TU188268 other upstream 1763833 18777768 ~ 18782159 (+) True G127500
TU188208 other upstream 1984382 18560366 ~ 18561610 (+) False G127456
XR_006246928.1 other downstream 1791 20551148 ~ 20556627 (+) False si:dkey-30c15.17
TU189467 other downstream 1851617 22400974 ~ 22406982 (+) True LOC122363143
TU189495 other downstream 1885449 22434806 ~ 22438679 (+) True G128367
TU189951 other downstream 2907743 23457100 ~ 23579802 (+) False cdh13
TU189952 other downstream 3175279 23724636 ~ 23736846 (+) False cdh13

Expression Profile