RNA id: XM_043216569.1


Basic Information

Item Value
RNA id XM_043216569.1
length 1119
RNA type mRNA
GC content 0.43
exon number 8
gene id cd151l
representative False

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 6817569 ~ 6829622 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCCATTCTTTCATTCAACGatggGGGCAAATAAAGAGAAGAATGAAACCTGTGGGACCATTTGCTTAAAATACCTGCTCTTCACCTTCAATTTTCTTTTCTGGctggcAGGGGGTGCAGTGATGGCTGTGGGCATCTGGACGCTAGTTGAGAAGAGCGACTACATCAGTCTGCTGTCCTCAAAGATTTACGCTATCTCTGCCTATATACTCATCGTGGCTGGGGTGATTGTTATGGTAACGGGGGTTTTAGGCTGCTGTGCCACCTTCAAGGAGCAAAGACGACTTCTAAGAGTGTATTTCGTTTTACTGCTGTGTATTTTCCTGCTGGAGATCCTGGCTGGAGTTTTGGCCTACATTTATTACCAGCAGCTGAATGAGGAACTAAAGGAGAACCTGAAGAAGACTATGGTTCAGAAATATCATCAGCCTGAGAATGAGCATGTAACGAAGGCTGTGGACAAGCTACAACAGGAGTTCAAGTGCTGTGGCAGTAACAATTCATCTGATTGGATGGAGAGTGCTTGGATCCGCTCTCGCGAGGCTGATGGTCGGTCGGTCCCGGACAGCTGCTGTAAAAGCCCAGTCATTGTGCTCTGTGGTCGGAGAGCTCATCCCTCAAATATCTATAAAGTAGAGggTGGCTGCATCACAAAGCTGGAGAACTTCATTCTGAATCACCTACAGATCATTGGTGCAGTCGGCGTGGGCATAGCTTGTGTGCAGATTGTCGGCATGTTTTTCACCTGCTGTCTGTACAGGAGTCTGAAATCAGAGCCATACTGAGGAGACACAGCATTAATCAGTGACCTTACGCTATTTTCGTTTCATAAAAACTGGAACGGGTTGGAAATGATTGAGGGTTCTGCACACCATTAATTCATCAAATCAATTCCAACTCTCCACAGGCACGGAGACACAAAAATCGTTTTTTTGAGGATTTTATGATCAGTCACACATTAAGTACTACTGAGCTAGAAAGTATCTTCCgttccttttttttaagtgccacgttgcttttattatttttattcattaacttAAGTTTggactgtattttttatatgaaacattttatgtaactttttttttttgtgtcctcTCAAATCCTcaatccaaaa

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU184283 lncRNA upstream 2934 6814324 ~ 6814635 (+) True G124795
TU184281 lncRNA upstream 11881 6805483 ~ 6805688 (+) True G124793
TU184270 lncRNA upstream 51103 6760783 ~ 6766466 (+) True G124783
XR_006253150.1 lncRNA upstream 59111 6757704 ~ 6758458 (+) True LOC122362680
TU184235 lncRNA upstream 126168 6689712 ~ 6691401 (+) True G124760
TU184287 lncRNA downstream 7078 6836700 ~ 6836922 (+) True G124799
TU184377 lncRNA downstream 98002 6927624 ~ 6927950 (+) True G124866
TU184378 lncRNA downstream 98705 6928327 ~ 6928540 (+) True G124867
TU184388 lncRNA downstream 111137 6940759 ~ 6941102 (+) True G124877
TU184418 lncRNA downstream 204821 7034443 ~ 7034667 (+) True G124902
XM_043264223.1 mRNA upstream 12885 6801428 ~ 6804684 (+) True LOC122362675
XM_043264225.1 mRNA upstream 57793 6737075 ~ 6759776 (+) True dhx36
XM_043263886.1 mRNA upstream 83287 6724830 ~ 6734282 (+) True LOC122362447
XM_043216904.1 mRNA upstream 245016 6568959 ~ 6572553 (+) True LOC122323211
XM_043216906.1 mRNA upstream 250960 6562926 ~ 6566609 (+) True LOC122323214
XM_043264118.1 mRNA downstream 2148 6831770 ~ 6834563 (+) False uraha
XM_043264117.1 mRNA downstream 2341 6831963 ~ 6834563 (+) False uraha
XM_043264116.1 mRNA downstream 2346 6831968 ~ 6834563 (+) True uraha
XM_043263916.1 mRNA downstream 11741 6841363 ~ 6844327 (+) True pdcd5
XM_043216931.1 mRNA downstream 39241 6868863 ~ 6871482 (+) True LOC122323232
TU184202 other upstream 276662 6539247 ~ 6540907 (+) True G124727
TU184178 other upstream 525644 6291491 ~ 6291925 (+) True G124707
TU184110 other upstream 838287 5976210 ~ 5979282 (+) True G124661
TU184051 other upstream 1187916 5623453 ~ 5629653 (+) True G124612
TU184037 other upstream 1422257 5394895 ~ 5395312 (+) True G124598
TU184395 other downstream 196696 7026318 ~ 7027135 (+) True G124881
TU184430 other downstream 343004 7172626 ~ 7173020 (+) True G124914
TU184436 other downstream 348217 7177839 ~ 7178276 (+) True G124920
TU184604 other downstream 1346731 8176353 ~ 8536948 (+) True G125041
TU184804 other downstream 2529814 9359436 ~ 9365488 (+) True G125192

Expression Profile