RNA id: XM_043216570.1


Basic Information

Item Value
RNA id XM_043216570.1
length 2665
RNA type mRNA
GC content 0.39
exon number 7
gene id cd151l
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 6817569 ~ 6829622 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGAAGTGTTCCATTTGggacagggacacacacacacacccctacCTAATGTCCTACTACAGATGTGGCCCTAAAACGGCAGCCTCTGGTATTACAAGAGTATAGCAGGGTTTTAGGCTAGACATTTTTTGGGCACCTGGCAACCCTGTTCACTTAGGGTGGAGCTCCTTGCAACTTTTATCTGGGCATGTTGTGTTTCTGCCGTTCGTTCTGACTGGAAAAAGTCGAGTTGGCCGATGAATTAAGTTCGATacggttctttttttttgaggacCGATTCTTACGTTTCTTTAGCAGTATTCCTCCATTTGATTGTTCTCGTCTGACATCGGCTAACAAAGatggGGGCAAATAAAGAGAAGAATGAAACCTGTGGGACCATTTGCTTAAAATACCTGCTCTTCACCTTCAATTTTCTTTTCTGGctggcAGGGGGTGCAGTGATGGCTGTGGGCATCTGGACGCTAGTTGAGAAGAGCGACTACATCAGTCTGCTGTCCTCAAAGATTTACGCTATCTCTGCCTATATACTCATCGTGGCTGGGGTGATTGTTATGGTAACGGGGGTTTTAGGCTGCTGTGCCACCTTCAAGGAGCAAAGACGACTTCTAAGAGTGTATTTCGTTTTACTGCTGTGTATTTTCCTGCTGGAGATCCTGGCTGGAGTTTTGGCCTACATTTATTACCAGCAGCTGAATGAGGAACTAAAGGAGAACCTGAAGAAGACTATGGTTCAGAAATATCATCAGCCTGAGAATGAGCATGTAACGAAGGCTGTGGACAAGCTACAACAGGAGTTCAAGTGCTGTGGCAGTAACAATTCATCTGATTGGATGGAGAGTGCTTGGATCCGCTCTCGCGAGGCTGATGGTCGGTCGGTCCCGGACAGCTGCTGTAAAAGCCCAGTCATTGTGCTCTGTGGTCGGAGAGCTCATCCCTCAAATATCTATAAAGTAGAGTGGGATATGTGAATATGGCGGTAAGAAATTACCACAATTCTTGGAGAATAAGAAGAATATGGAATATGTAATAACTACATGTAAATGAGAGTGAAGAGCTTTATAGAGAAGCTGATTTTTAAGCAGGACCACTTCCAAGTAGCTTGTTGACTATGATATTACTGTGCTTGATTGGCCAGACAACATCCCTGACCTGAACCCCATGTGAACTTTGTGGGATTTTCAAGAGAAACAGTACAGACAACAATACAGATGAGCTGAAGGCTCAATAGTGCCTCAGCAGTGCCATAGGCTCAGGAGCATCCATATTGCTTGTAGATGTTACTACATTTCAACTGAAGTTAACCTGTAGCAAATTCAATCGAATGGGTATGATTAAGGCACATCTTAGTAAAAGGTTTAACAGCTGATAATGCATATCAGAGGAAAACCCAAGCCCTGAAGTCAAAATAAATGCCTGAGATTAGAATCAGGTTTATGTCAAGCCTCACATCCGTGAAAGAGTTTAGAAAAAGTTCTGCTTCATTGAAGGATAACAGAAGCAAGTAGTCAAGTCTCTGTTACTAATGTAAGAAAGCAACCAGGACCTGGCCAATCTGAGAAACTGATGGAGAAGAACTTTGGTTAGTTTGGTGACCGAGAACCCGATGATCACTCTACTTTTAGCTCCATGATCACATGTGAAGTTAAATCTACAGATGGACAACCAATCTTTGCTGCATGGTGGTGTGGCAAGACTTCTCAAGATTCTCTGGTCTGATTGACACCAGCAACCATCACATCTGATTAACATTAACACCATCACATTTGAAGGAAACCACACAAATTCTATTCTTCTATTCTTTTGCACCAAATTGATATAATAaagagaacaataaaataatgtcattaacCGGTTAATTGTAATTTCATGTaaacaatttcaaatatttctgtTCAGAAATGTTCGTTTTCAGTTCCTGTTAATTGTCacttgtttccttttttttcatttcttgaaCTGGTTCAGAGCCATTATTTAATGCCccaaaaagcctttttttctttttacaatattttttcgTTTCATGAACAGATCACCCTCTCTTGACGATCATAGGCTGCGCTTATTAGCAATATAGTAAATCTTGCCGTGAGCCGAGAAGAGTTTCCAGAGCCAGATAAAGCAGTACAACAttgtttttagtgattttaattttgtacattttcgaatcattttttttttacttctatagTTATGTACACACTTTGAGTTATTTTCTGGTGATATTTGCGTTTCTgctttatttacctttttaaatacCAAACCAGTCGTGTGAAATGGAGCATTTGTGgcttgttttttggggggggtttttTGTCAGATGCCACTGGGTTAAAAACTAGCTTAAGGTTAAcaacattttccacatttttaaactgttgtttgatctttgtgtgtgtgtgtgtgtttataaaagataaagaaatgtTGTTTCAGAGACAAATTTTACCGTTCAAATCCAGTTGTTAAGATTCAAGTGAGTGTTCTCATGTACTCTATAtgtggagaaaagaaaaacaaaacatcactgCAAAATGTTATGCTTTAAGTTTAtacgtacatttttatatttgcatacaagaggcatataaatatgtaacataaatacataaagcctaatatttaaaatactttagatTTTTGCTTTGTcccattatttatat

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU184283 lncRNA upstream 3221 6814324 ~ 6814635 (+) True G124795
TU184281 lncRNA upstream 12168 6805483 ~ 6805688 (+) True G124793
TU184270 lncRNA upstream 51390 6760783 ~ 6766466 (+) True G124783
XR_006253150.1 lncRNA upstream 59398 6757704 ~ 6758458 (+) True LOC122362680
TU184235 lncRNA upstream 126455 6689712 ~ 6691401 (+) True G124760
TU184287 lncRNA downstream 8420 6836700 ~ 6836922 (+) True G124799
TU184377 lncRNA downstream 99344 6927624 ~ 6927950 (+) True G124866
TU184378 lncRNA downstream 100047 6928327 ~ 6928540 (+) True G124867
TU184388 lncRNA downstream 112479 6940759 ~ 6941102 (+) True G124877
TU184418 lncRNA downstream 206163 7034443 ~ 7034667 (+) True G124902
XM_043264223.1 mRNA upstream 13172 6801428 ~ 6804684 (+) True LOC122362675
XM_043264225.1 mRNA upstream 58080 6737075 ~ 6759776 (+) True dhx36
XM_043263886.1 mRNA upstream 83574 6724830 ~ 6734282 (+) True LOC122362447
XM_043216904.1 mRNA upstream 245303 6568959 ~ 6572553 (+) True LOC122323211
XM_043216906.1 mRNA upstream 251247 6562926 ~ 6566609 (+) True LOC122323214
XM_043264118.1 mRNA downstream 3490 6831770 ~ 6834563 (+) False uraha
XM_043264117.1 mRNA downstream 3683 6831963 ~ 6834563 (+) False uraha
XM_043264116.1 mRNA downstream 3688 6831968 ~ 6834563 (+) True uraha
XM_043263916.1 mRNA downstream 13083 6841363 ~ 6844327 (+) True pdcd5
XM_043216931.1 mRNA downstream 40583 6868863 ~ 6871482 (+) True LOC122323232
TU184202 other upstream 276949 6539247 ~ 6540907 (+) True G124727
TU184178 other upstream 525931 6291491 ~ 6291925 (+) True G124707
TU184110 other upstream 838574 5976210 ~ 5979282 (+) True G124661
TU184051 other upstream 1188203 5623453 ~ 5629653 (+) True G124612
TU184037 other upstream 1422544 5394895 ~ 5395312 (+) True G124598
TU184395 other downstream 198038 7026318 ~ 7027135 (+) True G124881
TU184430 other downstream 344346 7172626 ~ 7173020 (+) True G124914
TU184436 other downstream 349559 7177839 ~ 7178276 (+) True G124920
TU184604 other downstream 1348073 8176353 ~ 8536948 (+) True G125041
TU184804 other downstream 2531156 9359436 ~ 9365488 (+) True G125192

Expression Profile