RNA id: XM_043216628.1


Basic Information

Item Value
RNA id XM_043216628.1
length 3909
RNA type mRNA
GC content 0.43
exon number 4
gene id tmem91
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 615589 ~ 638864 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

aagagagatgtggagagagaagaggagaggaggatgCAAGGATCCGCTTCGCTGCTGTAGTTTGAAAGTCTCGCCAAGGGGACTTAGAAGAGCATTGGTGGTATAAATACCCAGCATAAACAGGATTAAAAGAGCAACTACTGACTCCATCAGAGAAGTGTTGAAGTGAGAGAgacaagcagagagagagagagcataaaGTGTAAGCATCAGGAGCGCTGTGTGCTGCGGTGTGTCTCTACACGCTCGCTTTACTATAGCACCTAACTTGGGAGACAACAAGCGTCACTTCTCAACTCTTTTACTGGAACACcatcccatctctctctctctctctctctctctctctctctctctctctctccatcagaCACACTCGTACACACAAATGGAGGATATGTGTTGGCGCTGAAGTATTGCTGAAGTTCAAACTGGGCCACTGGATTCATCTGTTTTGCTCCACTCATTTGGTCGAGTCCCGCTGGACACGCACCCAGATACAGACACCACCAAAGAATACAGGATCAATGGAAGAGCACAGTCCAAGTACCTCCATGAGAGGTGAGGGGCACCGGACACGACTCTGAGACACTTACACAGCTGGGAGAGCATGGCGCATTAAAGATACAGGTCCCCACAAGAGCTTTCTGGTCTCAGCTAGTGCTATAAATCAATAGCCGCGCACTCTGATTTCTTCATCAAGAAATTTCTCCTCAGCTACAAACAGAATGGCTTTCTTGAGCACTTGCTGACCAGAAACCGCACTCCAGAGGATACTATTTTTGTGGACGTCTGAAGTCTATTTCGCACTGCGGCTCTGAAAACCCACCGGATGACTAAAacgatatatttatatatatgtgcgcATAGCTGATAAAGCTGATAAGTCTTTCAACCACCTgtcaatgttctttttttacgCTTACGCTGACACTTCCTTCAAAGCTTCTGGCACTTCAGAGAACATTCCTATCAGCTTTGGACTGTCTAAATCGCAGCTATTTTTATTCCACTACATATTTAGATAAAAGTCTCCCACTACAGAATTCTGTTGAAAACATTTCATCTGAATGAGTGAGAGCAGAAGGGCGTTTCACGCTTAAAATCTTCACTATTTCACAACCTGTCTACAGTCTGTTGCTAATCATGGTTTCCCATCATCAGAAGtgacttccattttttttcatgcaaaatgaAGGCCATTAGCATATTTATGGGCTGAGATACATCCAATCGTGCGCTACATGGATCTTGCATTCAGTCATCGAGCAAAGAAACAAATAGCTTCTGACATGTGAAGGAAATGGAATATTCAAAAGCTTTTCGCATTTAAACACATGGACTAAAATGAAGGAGATGGAGGAGCACACGAGTTAGTTTCCCTGTTAAGGTTAATGCTTGTATCTGTgtgaaatcaaacaaaaaactatttaaactgtTGTTACTGCTTTCTTATGAAAGACATATTCGGAAGAGTAAAATTGTTGGCCCTATCAGCCGGAAAGCATTAGTTGATGTCAGATCTAGGTCTTGGAAAATGGAGAATCTGGATGAGCTAGAACATCCATTGTTGGGTGACAGCAGCCCTAAAAACTCAAGTGGAACAGGCTCAGGTAGCGGACTGTTTAAAAGCATGTTGATGAGAAATGAGGAGGACAAAAGACTGCCCCCTCTGGACTGGAGGAATTACTGCAGTTCTACAGACATTCAACAGCAGCAGTTACTGGATCCATGTTCATTGCCTAGCACTCTAGAGACCCTTTATCCTCCCACTACCATTTGGGCCGCTGCTGACTCCCTGGGCATCCACAGTAAGGAGTATCTGGAAACCACTTTTGTGGACATTGGCCCTGGTTCACCATTGGAAAGGAAGTTGCTGGCAGAGACAAGAGATGTCCATAGTGTATCCTACAGCATAGAAGATGGGGATGACCTTTTGCCAGACTTTGAGGACTCCTCCAGTGATGACTTCAGTGATACAGACAGCGAAAGCAACTTTCCCATCATGATCCCTCAAGATTACCTGGGCCTGGCTTTCTTCTCCATGCTCTGCTGTTTCTGGCCTCTGGGCATTGCTGCGTTCTACCTTTCCCAAAAGACGAACAAAGCATCAGCACAAGGAGATTTCCAGGGTGCTAGTGCGGCGTCTCGCCAGGCTCTGTGGCTCTCTATCCTTTCGATCGTGTTCGGCATCGTCACTTACATCTGTGCCATCGCTGCCCTGATCTCCTATCTGTCCGGGAAGCCACCTTAAAGACTACTGTATCGGTATCTACTCTCAATTCTTCCAGAAACGCACCTCCCTGGTTCCTAATTACACAATCCGCTGCTCCTTACATACGTACGTTCATCTTCACCTGTAATAAGTACATTCATTTTGCAGATACGCCACCTTCACGGCTGtcatattagatttaaaaaaatgcaaaacactaCATAGTTTCAGCTGAAATCTTAGTATTTGGGTCAAACACATATGACACCCACTTTAGAAAGAGAGACCTGCGATCTGCCTTGGCGCTCGCGTCGAAGTTGGCAGGGGAGGGAGTGACTGAGGCCTAAGGGTTTGTTAGAAGGGAACTAGACAAGGGCCGCGAGATCAGGAGATCACAACGGACTTGGCTGCGAGACAGCGGGACGCGTCCACCGAGACGCATGACTTAAACGAACTGGGTCATTTTCTAGCCGAGCTCCGAAGCCGGTCATCGTAATTCACTCTCCAAATTGAAAACACCAGAGTAAATGACTTTAGAGCTCGGTCGGAAACTGCGAGGTAGGAAACAAGTACAAGTTCAGGCAGATACTGCAAATATGAGGATGCATATCAAGCACGCACAGGCAAAAGTTCAATGCGATGAGGGAAAGACACACGTATATAAGCCGCAGCTTTCACTGAGTCATGCTGTTATGAGAAGCTTCTCCCGCAGAACTCTATTCATAGCTTGATAAATGTAGACTCTTCATTTTCCACCTACTGTACCAACAAACCGTATGGAGACGCTTCATACGATTCAGCCGAACCATGCCTGCAAACTCTGGACTGGTGAAAAGGTGGTAAATCGGGACTCGGGCCACAAtgctattttcttattttttcctatcatttattaatcaatttaagatggaaaaacatcAGAACAATTTGAAttgctgaaaagaaaaacaatggcaCATAGACGTTTCATACATTTTGTGGGTCATTTCATGTATCAAGCATTATAACATaacattattcattataattatgaTTCTTTCAGTAACCCGCATTTGCCTTTGTGGTGTCGATCAGCAAGTCTTTGCATAAACTTAGCACTTAAGAACATTTTCACGAACTTGGATTTTATCTTAAGAAATTTCTCCGCTATCTCACGACCGAATTGTGCATATTGCTAATTCTTACCACTTCACTTGTagttttgtatgatttttgcAACTCGTAAAATACGTATGATTTAGGAAAAACAGCTCCACAGTTCAAATGATGAAGCCTTTTTAAGGATTTCATCCTTCGAACCGCGTTTTTAAGAAAAGGGATGAATCAAAATGATAAagttatgtaataatataactaTCCTgaacaaaaaacagcaaaaaggcTGAATGAAAATTCCAATTATAGGTGCCGCTTATGAAAAGCAGAAATTCAGCGGTTAGCCCTGTACACAAAGCAGATGTGCTTTTTAAACACCACTGCATTGACATTATGAtgaaaaaactgtcaaaaacacTCAGCTCATGTTAAAGATACATTCAGTTTTGTGCCAAAGCATAGAGTTTGCAGGtatgtaaacatctttaaacGACAAGCCTGTAATTTATATTCATCCTGAAGTACGGAACAAATAATATGtgttatttgtaaatgtgaaataaagaGTATTTGCCTGTCTGGGCAGTTATTATCTTAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU182193 lncRNA upstream 85970 529398 ~ 529619 (+) True G123312
TU182176 lncRNA upstream 102957 511298 ~ 512632 (+) True G123301
TU182152 lncRNA upstream 139188 464104 ~ 476401 (+) True G123282
TU182402 lncRNA downstream 211789 850653 ~ 919977 (+) False G123422
TU182403 lncRNA downstream 251906 890770 ~ 919977 (+) True G123422
TU182468 lncRNA downstream 384241 1023105 ~ 1051430 (+) True G123472
XR_006246948.1 lncRNA downstream 457599 1096463 ~ 1129331 (+) True LOC122323124
TU182487 lncRNA downstream 457599 1096463 ~ 1128705 (+) False LOC122323124
XM_043264799.1 mRNA upstream 19175 580746 ~ 596414 (+) False ppp1r13l
XM_043264802.1 mRNA upstream 19175 580746 ~ 596414 (+) False ppp1r13l
XM_043264800.1 mRNA upstream 19175 581058 ~ 596414 (+) False ppp1r13l
XM_043264801.1 mRNA upstream 19175 581700 ~ 596414 (+) True ppp1r13l
XM_043264644.1 mRNA upstream 48924 548818 ~ 566665 (+) True rasgrp4
XM_043216586.1 mRNA downstream 4913 643777 ~ 652535 (+) True bckdha
XM_043264024.1 mRNA downstream 168502 807366 ~ 813395 (+) True siae
XM_043264025.1 mRNA downstream 168502 807366 ~ 813395 (+) False siae
XM_043264835.1 mRNA downstream 175887 814751 ~ 823675 (+) True LOC122362993
XM_043264834.1 mRNA downstream 175900 814764 ~ 823675 (+) False LOC122362993
TU182087 other upstream 506757 108369 ~ 108832 (+) True G123243
XR_006253182.1 other downstream 175900 814764 ~ 823177 (+) False LOC122362993
XR_006253178.1 other downstream 406347 1045211 ~ 1054735 (+) True tmem123
XR_006253179.1 other downstream 406347 1045211 ~ 1047991 (+) False tmem123
TU182587 other downstream 926562 1565426 ~ 1571931 (+) True G123568
TU182722 other downstream 1362922 2001786 ~ 2002290 (+) True G123664

Expression Profile