RNA id: XM_043216735.1


Basic Information

Item Value
RNA id XM_043216735.1
length 1531
RNA type mRNA
GC content 0.46
exon number 11
gene id napab
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 12917226 ~ 12925468 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCGGCCATGTTGGAAGTTTCCGCAGAGATGTGTTGATGTGGCTGGATTCCAGAGTCTGCTGCTGTTGAACTGTAAACATTATTCATGGATAACTCCGGGAAAGAAAAAGAGGCCATGGCTCTCATGGCTGAAGCCGAGAAGAAAGTAAAGTCATCGCAGTCGTTCTTTGGCTCTCTGTTTGGGGGCTCTTCAAAGATGGAGGATGCTTGTGACTTGTATGGAAGGGCTGCGAACATGTTCAAGATGGCCAAGAATTGGAGTGCTGCAGGAAACGCTTTCTCCCAGGCGGCGCTCCTACACTTGCAGATGCAGAGTAAACACGACGCAGCCACAAATTTCATTGATGCCGGCAATGCCTTTAAAAAATCAGACCCTCAAGAGGCCATAAACTGCCTGAACAGGGCCATTGAGATCTATACAGACATGGGTCGATTTACTATCGCAGCCAAACACCACGTCACTATTGCTGAAATTTACGAGAGCGAACTGGTTGACATTGACAAGGCAATAGCTCACTATGAACAGGCGGCAGACTATTATAAAGGCGAGGAGTCCACGAGTTCAGCCAACAAGTGCCTGCTCAAAGTTGCCACCTATGCAGCTCAGCTGGAGCAGTACCCTAAAGCCATTGAGATCTATGAACAGGTTGCAACACACGCAATGGACAGCACCCTGTTGAAATACAGCGCAAAGGACTATTTCTTCAAGGCAGCTCTCTGCCACTTCTGCGTGGACATGCTGAACGCTAAGCTTGCCGTCCAGAAGTATGAGGAAATGTTTCCAGCCTTTTCAGATTCACGTGAATGCAAATTGGTGAAGAAACTTCTAGATGCCTTTGAGGAACAGAATGTGGACGCATATACTGACGCTGTAAAAGAGTATGACACCATCTCGCGTCTGGATCAGTGGCTCACCACCATGCTGCTTCGTATAAAGAAATCCATACAAGAAGACGAAAGTGATCTTCGCTAAGACCTTCTTCCTCCCCCCCGGCCCTTGCCGCTCGCTCTGCCTCGTGCCTTTAACACCGTGACTTCAGTATGATGGTCGAATATTGCTCTCTTTTACCACCAACTCTACTCTCAGTGCCTTAACGCCCTTGCTTtacctccctctctctctctttctctctctctctatgacACAGCCGTATCTCCAGACCTCAGAGAACACTAAAGAAAGGAAGGCTGGTTGTTTAAGTGAGATTTGAGGGAGTGTTGCATGAGAGCTGCAAGCAGCCACAGTAATATTAAGGGGTGCTGTGCACACCAAGCTTCAGAAAAAATGCCTTGTGCTCTGGCTGAAACAGAGCACCCGTATTACTGAGCGCAAAAAGCCTTTGTTCATTCTGTTCTTTAGTTGtggcatatgttttttttttttttttgtggaaacacaATACCTTGTATCTCTGCTTATTTTTTGCTTGCTGATTGACTAATCttgaaaaattatttgaaatgctgttcctgttttttattttgacatgtggagaagaaaaagagtaaAAGAAGGACTGATTCAGCCTGTA

Function

GO: NA

KEGG:

id description
K15296 NAPA, SNAPA, SEC17; alpha-soluble NSF attachment protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU185741 lncRNA upstream 275790 12641192 ~ 12641436 (+) True G125784
TU185740 lncRNA upstream 280843 12636156 ~ 12636383 (+) True G125783
TU185704 lncRNA upstream 327282 12579725 ~ 12589944 (+) True G125760
TU185696 lncRNA upstream 504981 12411865 ~ 12412245 (+) True G125753
TU185692 lncRNA upstream 522494 12393511 ~ 12394732 (+) True G125750
TU185840 lncRNA downstream 84406 13009874 ~ 13012900 (+) True G125855
TU185872 lncRNA downstream 291046 13216514 ~ 13218281 (+) False LOC122362547
TU185885 lncRNA downstream 412286 13337754 ~ 13339066 (+) True G125877
TU185887 lncRNA downstream 421210 13346678 ~ 13346937 (+) True G125879
TU185889 lncRNA downstream 425023 13350491 ~ 13351730 (+) True G125881
XM_043265033.1 mRNA upstream 2913 12905342 ~ 12914313 (+) True ehd2b
XM_043264694.1 mRNA upstream 12643 12891984 ~ 12904583 (+) True bicra
XM_043263899.1 mRNA downstream 1217 12926685 ~ 12931168 (+) True b3gnt2l
XM_043216851.1 mRNA downstream 21373 12946841 ~ 12955945 (+) False glb1l2
XM_043216853.1 mRNA downstream 21380 12946848 ~ 12955945 (+) False glb1l2
XM_043216852.1 mRNA downstream 21391 12946859 ~ 12955945 (+) True glb1l2
XM_043216625.1 mRNA downstream 31145 12956613 ~ 12966494 (+) True ilvbl
TU185810 other upstream 32614 12880588 ~ 12884612 (+) True G125836
TU185801 other upstream 94445 12809450 ~ 12822781 (+) True G125830
XR_006246968.1 other upstream 1680079 11234331 ~ 11237147 (+) False selenot1b
TU185364 other upstream 1680085 11234349 ~ 11237141 (+) False selenot1b
XR_006253172.1 other upstream 1685512 11226115 ~ 11231714 (+) False ccnl1a
XR_006246961.1 other downstream 21373 12946841 ~ 12955945 (+) False glb1l2
XR_006253128.1 other downstream 291016 13216484 ~ 13218337 (+) False LOC122362547
XR_006253129.1 other downstream 291189 13216657 ~ 13218346 (+) False LOC122362547
TU185911 other downstream 501629 13427097 ~ 13430765 (+) False rpl35a
TU186277 other downstream 753577 13679045 ~ 13682571 (+) True G126132

Expression Profile