RNA id: XM_043216916.1


Basic Information

Item Value
RNA id XM_043216916.1
length 3552
RNA type mRNA
GC content 0.47
exon number 24
gene id kif23
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 4292237 ~ 4301878 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCGCTGATTGGTCACATTTGAAAAATCTGTTGCTGACGCGCTGGAGGGAACGTTTGAATGTCGGAATTTATATACGGATAAGAAGGCAACGGCGTCGCGGAGCTAAACTAAAACATCTCAATATGATTAGGCAAGCGAAGGGCAAGACCCCCCGCCGCCCTCCTCCAAAAAAGCCTTCCAACAACCAGAAGGACCCTGTTGGAGTGTATTGTCGCGTGCGTCCACTGGGTGCAGAGGATGAGGAATGCTGTATTGAGGTTATAAGCAACACCACCATACAGTTACATGCTCCTGATGGACTCAAAGCTAACAGAAATGGTGAATTCAAAGAGacACAATACTCCTTCAAAAAAGTGTTTGGAATTAAAACCACACAGAGGGAATTATTTGAAGATGTTGCCAAACCTCTAGTGGAAGACCTCATTCactgtaaaaatgGTTTGTTGTTCACCTATGGTGTCACCGGCAGTGGTAAAACTTACACAATGACTGGCTCACCTGGTCAAGGTGGGCTGCTTCCACGCTCACTGGACATGATCTTTAACAGCATCGGCCCCTACCAGGCCAAAAGATATGTTTTCAAACCTGATGACAAAAATGGAATGGAGGTGCAGAATCAGGTAGATGCGCTCTTGGACAGACAAAAGCGAGACAGCCAGACAGCTGTACCGAAGACTCCAACAGCAAGGCGAGTTGACCCGGAGTTTGCTGACATGATTAGCCCAGAGGAGGCTTGTAAGGCAGACGGAGTGGATGAAGACAGCAGCTACAGTGTCTTTGTCTCTTACATTGAGATTTACAACAACTACATCTATGATCTTTTGGAAGAGACCCCCTTTGACCCAATAAAACCCAAgTGGAATGGTGCAGGCACACCTCTGAGAAACAACACTGAGTTCATACCACCCCAATCTAAAATACTGCGTGAAGACCAAAATCACAACATGTATGTGGCTGGGTGTACTGAGGTTGAGGTCAAGTCAACAGAGGAAGCTTTTGAAGTCTTTTGGAGAGGTCAGAAGAAGCGCAGGATTGCAAACACACAATTGAACCGCGAGTCCAGCCGCTCTCACAGTGTGTTCATTATTAAACTGGCACAAGCGCCTCTGGATGCAGATGGAGATAATGTGCTTCAGGATAAAAATCAGGTAAATGTGAGCCAATTGTGTCTGGTGGATCTGGCTGGCAGTGAACGCACTAGCAGAACCAGAGCAGAGGGCAGCCGTCTCCGTGAAGCAGGCAACATCAATCAGTCTTTAATGACTCTGCGCACATGCATTGAAGTTCTAAGGGAGAATCAGATGTGTGGCACAAATAAGATGGTTCCATACAGAGACTCCAAAGTGACCCATCTATTTAAGAACTACTTTGATGGAGAAGGCAAAGTGAGGATGGTCGTGTGTGTAAATCCAAAAGCTGATGATTATGAGGAGACCTTGCTGGTGATGCGTTTTGCTGAGATGACTCAGGAGGTTGAAGTGGCCCGGCCTGTTGATAGGCCCATTTGTGGTTTCGCTGCTGGTCGCCGACAGAGAAACCAGGCCTTCAAAGAGGAGCTTACCCGCAGGCTGGAGGAACGTGGTGGTCCTTTAGAtggagAGTCTCCAACAGTATTGAACCAGCTGCTTCAGTCCTTCCCTTCACTTCCTCCCTGTGAGATCTCTGGCCCTAACGATGATGTTACACTGCCCAGACTTATTGAGGCGTTGGAGAAGAGACACAAGATTCGACAGATGATGATCGAGGAGTACAATAAAACTGCCAACATGTTGAAGTCTGTGCTTCAAGAACAGGACAGCAACCTGCTCTCTAAAGATAACTTTATCCAAGAGCAGCGCGGCAAGCTTGGTGAAAAGGACAAAATGCTCCAAAACCAAAAGAATGAGATTGATCGTCTGGAAAAGAAATCCAAGATGCTGGAATATAAGATTGACATTCTACAGAAAACCACCAACATCTATGAAGAGGACAAGCGATCTCTACAACAGGAACTGGAGAGCAGAGAACAGAGGCTGCAAAGGGAGGTGTCTGAAAAAAGACGCATGGAAACACGCATGCAAGGCATTGTCACAGATGCCAAGCTTAAGTGGGAGAaggagtgtGAGAGGCGGGTAAATGCCAAGCAGCTGGAAATGCAGAATAAGCTGTGGGTGAAGGATGAGAAACTCAAACAGCTCAAAGCCATTGTGACTGAGGGAAAGTCGGAGAACCGGCAGCCACAGCGGCCCTCCAGAGAAAAGGACAAAGTGCCTGCCAAGAGATCCGCTTCCCCATCGCCTGTTCCTTCTCCCTACAATGGCTCTCAGTCATCCCTCTCCTCCCTGGAGCCCATATATAACTTCTCTCAGACGGTCAGGCCAGATCCTCACTTCCCCAGACCAGGCAGTGTGTCTGTGGCCTCCTGCATCTCCGAGTGGGAGCAGGGTGTCCCGCACTCTCGCAGGCAGGGTAGCCAGTCGCCTCCAGACAGTAGGAAGAGAGCTCAGGGCCTTCCCGACAGTCTTAGCAGGAGAAGAGGCAGGTGTTGGGCCAGAGAGGTGCCTGTCCGGCCAGCAGAGGTAGACCTAGAGGAAACTGGTTATTGGACTGGGCCGCCGGTTCGGCCTCTACACAGACGCTCGCACTCCGCAGGTGGGGAGAGGTGGGTTGATCATAAACCCACCACTAACGTGGACCTGGATACAGTTCTGCAGCCAAACATCCCCAAAGCCATCAAAGTGAACGCTCCCAATGAGAAAGCTCTGTCCAAGTGTGACAAGTACCTTCTGACGCACCAGGAGGTTGCGTCAGATGGAGAGATTCAGACCAAGCTAATCAAGGGTGAAGTGTTCAAAACGAGAGGTGGAGGACAGTCTGTTCAGTTCACAGATATCGAAACGCTCAAGCAAGAAAACCCTGTTGCAGCGGGCCGAAAGAGACGATCATCAGAGACTGGCCCCGATGGTGAGACTATGGAAGGAGACTGGACTGATGTAGAAACCAGGTGCTCTGTGGCAGTGGAGATGAGAGCTGGCTCAAACTTGGGACCTGGTTACCAGCATCACGGATATCCGAAacgCAGAAAGCCTTGAGACTGCTCTAGTATTGCCATCACAGCAGAGTCCTCTCCTCTCGAAGCCTCGTATCACTGTGTGCAATAGAAAATTcactttataatatttaactttttaaaaatgcttttatggaaaaactcatttttataGAGGACAACACAAGTTCACCAAAGCTGTTTTGTACTGCATTTTCTATCTGGGTGTTGCCATGTCATATTCACTTTTGTGTGGGTTTCAAACAAAGTGttacaaatattgttttctaaCTGTCTCTCAAGCACAttagttatttgtatttttttttttttaatgtatgttgaTGTATACTCTTGCATTTGGACAGTTAGGACAATCAAAGCATTtggtgtttctttaaaaatccttttaaGTCATTTTCATGACTTTAGTAGACAGCACCCTGGAACAGCACTCTTTCCATGTAGTTTCACTTGTATGACATTGCTGCAGACAAAACTGTTAATAAACAGcatttgatata

Function

GO: NA

KEGG:

id description
K17387 KIF23; kinesin family member 23

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU183657 lncRNA upstream 108586 4182733 ~ 4183651 (+) True G124295
TU183656 lncRNA upstream 109846 4181385 ~ 4182391 (+) True G124294
TU183655 lncRNA upstream 110948 4180426 ~ 4181289 (+) True G124293
TU183654 lncRNA upstream 112881 4179040 ~ 4179356 (+) True G124292
TU183476 lncRNA upstream 156637 4135383 ~ 4135600 (+) True G124161
TU183831 lncRNA downstream 159967 4461845 ~ 4462124 (+) True G124427
TU183828 lncRNA downstream 174669 4476547 ~ 4477879 (+) True G124425
XR_006246939.1 lncRNA downstream 386156 4688034 ~ 4691944 (+) True LOC122323045
TU183914 lncRNA downstream 442882 4744760 ~ 4745307 (+) True G124497
TU183915 lncRNA downstream 443725 4745603 ~ 4745835 (+) True G124498
XM_043264129.1 mRNA upstream 776 4287449 ~ 4291461 (+) True paqr5a
XM_043264128.1 mRNA upstream 776 4287449 ~ 4291461 (+) False paqr5a
XM_043264130.1 mRNA upstream 1209 4287447 ~ 4291028 (+) False paqr5a
XM_043265119.1 mRNA upstream 10300 4280090 ~ 4281937 (+) True LOC122363152
XM_043265039.1 mRNA upstream 28526 4257020 ~ 4263711 (+) True ighmbp2
XM_043264727.1 mRNA downstream 283311 4585189 ~ 4588702 (+) True aagab
XM_043216674.1 mRNA downstream 421161 4723039 ~ 4725612 (+) True snapc5
XM_043216670.1 mRNA downstream 424572 4726450 ~ 4735467 (+) True lctlb
XM_043216673.1 mRNA downstream 438265 4740143 ~ 4743910 (+) True rpl4
XM_043216538.1 mRNA downstream 457750 4759628 ~ 4795836 (+) True LOC122322928
XR_006253139.1 other upstream 548481 3719888 ~ 3743756 (+) False nrn1la
TU183320 other upstream 737547 3511966 ~ 3554690 (+) True tmem170a
TU183022 other upstream 1986659 2302526 ~ 2305578 (+) False plin1
TU182722 other upstream 2289947 2001786 ~ 2002290 (+) True G123664
TU182587 other upstream 2720306 1565426 ~ 1571931 (+) True G123568
XR_006246974.1 other downstream 438990 4740868 ~ 4740965 (+) True LOC122323235
XR_006246980.1 other downstream 439377 4741255 ~ 4741324 (+) True LOC122323241
XR_006246981.1 other downstream 439676 4741554 ~ 4741651 (+) True LOC122323242
XR_006246975.1 other downstream 440429 4742307 ~ 4742435 (+) True LOC122323236
TU183924 other downstream 457759 4759637 ~ 4793251 (+) False LOC122322928

Expression Profile