RNA id: XM_043264677.1


Basic Information

Item Value
RNA id XM_043264677.1
length 5691
RNA type mRNA
GC content 0.50
exon number 29
gene id abcc5
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 13431895 ~ 13458567 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGTGAACTTGCAGCGAAGGCACGTTACACTACATTTCCCATAACGACGCCCGTCCGAATCCTTCAAATAGCTGGTTTATAACGAAGTTGTTTTGCTCCATCCGCTATTGAAGATCCGCAGACCAACCAGGCGAACAGTTCAGATTTGGAGGCTTTGACAAGATCAAGCTCAGAGAAGAAGCAAAAAAAGCGCTCCTATGTTGGTGAAAGAAGATGAAAGGACATGATTTGGGAAAGGACTGTCTGGCATCTGGTTCTGCGTACAGGGCCGTACCGTCCAGAGAGACCCTTCCCGGACCTGAAGCGGACCATTACGAGCTGTCCAAAGTGCAGGATGCTTTTGAAACGGCGGCGAGGGCTGAGGGTGGCCTCTCATTGGATGGGGGCAGTGTCGCTGACGCAAAAGAGCTGGAGGACGAAGTCGGTAGAAGCAAATACCACCACAGTGTTTGTGTACTCAAGCCCATCCGATCCACCAGCAAGTATCAACATCCAGTCGACAATGCTGGCCTCTTCTCCTTTATGACATTTAACTGGTTGACCTCGCTTGTGGTGTTGGCCCATAAGAAGGGTCAGCTGTTTCTGGAGGATATATGGGCCGTGTCGCAGTTCGAGAGTTGTGAGGCCAATCGTCGCCGGCTGGCCGGGCTGTGGGATGAAGAAATCAGGTCACGAGGGGACGGGGCGTCTCTTCGTCGTGTGGTCTGGCATTTTTGCCGCACACGTCTGCTGCTGTCCATCCTCTGCCTTATGGTTACTCAGCTCGCAGGCTTCAGTGGCCCAGCGTTTGTGGTGAGGCGGTTGCTGGAGTACACGCAGAAGAGCGAACCCGACCTGCCCTACGGCCTGCTGCTGGTGCTGGGCCTCTTGGCCACCGAGCTGATTCGCTCCTGGTCCCTCGCCCTCACCTGGGCGCTCAACTACCGCACCGGCACCCGTCTGCGCGGAGCCGTCCTGACCATGGCCTTCCACAAGATACTGCGTCTGCGCAGCCTTCGGGAGAAGAGCATGGGAGAGCTGATCAATATGTGTTCGAGTGACGGGCAGCGCATGTTTGAAGCCGCTGCCGTGGGCAGCCTGTTGGCCGGAGGCCCCCTGGTGGCCGTGCTGGGAATGGCTTACAACTTATCCGTATTGGGGCCGACGTCTCTGCTGGGCTCTGCTGTATTCATCCTCTTCTACCCCACCATGATGTTTAGCTCCAGGCTCACGGCGTACTTCAGGAGGAAGGGAGTAGCCGTGACTGACCAGCGCGTTCAAAAGATGAATGAGATTCTGAACTACATCAAGTTCATTAAGATGTATGCCTGGCTTAAGGCCTTCTCTCAAGCTGTACgaaGAATTAGAGATGAGGAGCGTCAGATTCTGGAGCGAACCGGATATTTTCAGAGCATTACAGTCGGCGTGGCACCCATCGTCGTGGTGATTGCCAGCGTGGCCACATTCTCCACTCACATGTTGCTAGGTTATGACCTTACTGCTGCACAGgcATTTACTGTCGTCACTGTTTTCAATGCCATGACCTTTGCCTTAAAGGTCACCCCATTTTCCGTCAAATCCCTATCAGAGGCATCTGTCGCCATTGATAGGTTCAAGAGTTTGTTACTGATGGCTGAGGTCAAGATGATCCGTGAGCTGCCGGGGAATCCTTCCGTTGCGATAGAGATGACCGGTGCCAGTTTGGCTTGGGAGACAGGCGGTCACAGCGCTCAGCCTTCGCCCCGCGGTACACCCTATGTAGGCCTCGGCAAGAGAGGCTGTCGCAAAAAGCGCCAGCGGCCTGACGACCCGAAACATCACAGGATTCTGGAAGAAGAGACGCATGGCCAGCTGTTGAATGATGTGTCTGTAGACATGGCGTCAAGTCCTGACGAACAAACCCTTCAGGTTCCCACCATCAGCCAACGGCTGCAGAGAACTCTTCATTGCATCGATCTCTCCATACAAAAGGGGAAGCTGGTCGGCGTCTGTGGGAGTGTGGGAAGTGGCAAAACATCTCTCATCTCTGCCATTCTTGGCCAGATGACGCTTTTAGAGGGGACTGTTGCCGTTAATGGAGATTTCGCGTATGTGGCACAACAGGCCTGGATTCTCAATGCATCCTTCCGTGACAATATCCTGTTCGGCAAGGAGATGGAGGAAGAGAGGTATCAGGCTATACTGAGTACTTGCTGCTTGAGACCAGACTTGGCCATCCTCCCTAATTCTGACCTGACTGAGATTGGAGAACGTGGTGCTAACCTGAGCGGCGGCCAGCGCCAGCGGATAAGCCTGGCTCGAGCTTTATACAGCAATAGAGACATTTACATTCTCGATGACCCTTTAAGTGCTCTGGATGCCCATGTCGGGAATCACATCTTCAACAACGCCATTAGAAAACATCTGCGTGGCAAGACAGTCATCTTTGTCACTCACCAGCTACAGTATCTGGTGGACTGTGACGATGTGATCTTCATGCGGGATGGCAGCATCACAGAGCAGGGCAGCCACGAGGACCTGATGAATCTGAATGGAGACTACGCCGCCATGTTTAACAACCTTCAGCTGGGAGAAACACCCATTATTGAGGTTCCGAATAAGAACTCCGGGAGTTCCTTGAAGAAACCCTTGGAGAACAAAAAGGCAGGATctgtcaaaaaagaaaaatcagccAACCAGGGTGATGgtcaGCTGATGCAGGTGGAAGAGAGGGGGAAAGGCTCAGTGCCCTGGGAAGTGTACAAAGTGTACATCCAGGCTTTAGGAGGGTGGCTTGTCTTCCTCTTTATCCTCGCCCTCTTTGTTCTCAACGTGGGCAGCACAGCATTCAGCAACTGGTGGCTCAGCTACTGGATCAAACAGGGCAGCGGGAACACGACAGTGCAGGTGGGGAACAGTTCAGTATTGAGTGAGAGCATGCGAGATAACCCTCTGATGCAACACTATGCAGCTGTCTACACCATGTCTATGGGAATCATGCTTCTTCTCAAACTACTGAGAGGCATTGTGTTTGTCAAGggTACTCTGCGTGCCTCATCAAGGCTCCATGAGGAACTTTTCCAGAAGATTCTTCGCAGTCCCATGAAATTTTTTGACACCACACCCACGGCTCGCATCCTGAACAGATTCTCCAAAGACATGGATGAAGTGGACACGCGTCTGCCCTTCCAGGCGGAGATGTTCATTCAGAACGTGATTCTGGTGCTTTTCTGCCTGGGTATGATTGGCAGCGTGTTCCCGTGGTTCCTGGTGGCAGTAGGGCCGCTGGTCCTCCTCTTTACGGTGCTACACGTGGTTTCTCGGGTCTTCATTCGAGAACTCAAACGATTAGACAACATCACACAGTCACCTTTCCTGTCCCACATTGCCTCCAGCATTCAGGGCCTGACCACAGTGCATGCTTACGGGAAAGAGGACGAGTTCCTTCACAGGTATCAGGAGCTGCTGGATCAGAACCAGGCTCCCTTCTATTTGTTCAGCTGCGCCATGCGCTGGCTGGCTGTTCGTCTGGATGTGATTAGCGTGGCTCTCATTAGCATCACGGCTTTGATGATCGTCCTCATGCACGGCCAGATTCCTCCTGCGTATGCAGGCTTGGCCATTTCCTATGCTGTGCAGCTAACAGGGTTATTCCAGTTTACCGTTCGCTTGGCCTCTGAGACCGAAGCTCGGTTCACCTCAGTGGAGAGAATCCATCATTACATCAAGTCTCTGTCTCTGGAGGCTCCTGCGAGGGTGAAAAACAAGGCTCCTCCATCTGACTGGCCCCAGGAGGGTGAGATCGTGTTTGATGGAACGGAGATGAGGTACAGAGACAACCTCCCAATGATACTGAAGAAAGTTTCCTGCACCATTCGACCAAAAGAGAAGGTCGGGATTGTGGGACGAACGGGTTCAGGCAAGTCTTCTCTGGGAGTAGTTCTCTTCCGGTTGGTAGAACCATGTGGCGGCTCCATTAAGATCGATGGTGTCAACATCTGCAACATCGGCCTTGCTGATTTGCGCAGCAAACTGTCAATCATTCCACAGGAGCCAGTGCTTTTCAGTGGTACTGTCAGATCCAACTTGGATCCGTTTAACCAGTATTCAGAGGAGCAAATCTGGGATGCCCTGGAGAGGACACACATGAAAGAATGCGTGTCTCAGCTGCCTTTAAAGCTGGAGTCCGAGGTGGTGGAAAACGGGGAGAATTTCTCTGTGGGTGAGCGGCAGCTGCTCTGCGTGGCCCGAGTTCTTCTGAGACAGTGCAAGATCTTGATTCTGGACGAGGCCACAGCGGCTATGGACACGGAGACTGACTGTTTGATTCAGGAGACCATCCGTAACGCATTCCAGGACTGCACCACGCTGACCATTGCGCATAGATTGCACACAGTGCTCAGCTGTGACCGTATCATGGTGCTCAATCAGGGTCAGGTGGTGGAATTTGACGAGCCGTCCAAGCTCTTGGCGAACGAAAACTCACGCTTCTGTGCGATGCTGGCAGCGGTGGAGAACAAAATCTCTGTAAGAGGCTAAAGGATGTCCGAGCCAAGGTTTTCGCTCCCGAGGACCGAAGGGAACATTCTCCATTAATATTCCAGTCATTGCTGCTTCAATGTTACTCCCTCCTGCAAACCTATAGGGACCTGGGGAGGGAGAGTATTGTATTTCCATGAAACTCATGGGCTGTCATTAGGGGCATGCCTGTTAAGATGTACTACTTGTCGAGCTTAAATGATTAGGTCAGGAAACACTGATACTGTAATGATATTCGCGTAACGAAGTGGGGAAATCAGTTTTCATGTAGTTGAATTCATGCAAACTGGTGTGTTTTACAGAGTACATATCTCTGTttatatgagtatatatatttacaaggTGGTGGCGGAGTCCTTTTGTATTGATTCTGCCGGtctatgtacagtatgtaatatatacatacattcagATGTATCATCTTTCattacagtttaatatttttgacaaCTTGACAGTCTTCAGTACATGTGTAAATGTTGTCTTGTGACTTGAACCCTAAACTTTGGCACAGGTGACGTCGTCCACAGGATGTTGTACAAGCACTGAGTAAGTGGGACTCTTTTTAAGAGAAACAGTGCTGCTTATTTACTGTCTCCTTGTTCAGCACACCAAGGATTCAGTCTTATTTAGCTAAGAGgcctttgtatatttatagcCTATTTCCACCGTTAACATTTTTGCCTGTTCCtttgatttttttcctcttacgtggtatttttattttttatttttttttgctcttttacgTATGAAAGCATTTCTCGTTTCGGCTTGTTTTTGCACTTTGCATTCACCTCTGTAGGAGGTCACTGACGTTGTTTTGACTTTGTCCCAAAAGAGACGCTCGTCGAGCATAATCTTAGCAGGCCAAATTTGCTAGAACGggccttttgttttttttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttacggTGTCTATCACAGCACTGGTACAAAGAGAGCGCTCTGAATGGACTTTCTGAATCAGGTTGTGATGGCGGTCTGCGTGAAGGGGAAGACGATTGCCCCCTCAACAGACCCCCGAATATATGTCTCtcgtttccatttttttttttcatagccTTAGCATGATTTCTTAATTGCCTTGTGAAAAGGGTGGAAGGAGAGCAGGAGAGCGTAcgctctctcctctgtctcaataaatttattttaggttta

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0042626 ATPase-coupled transmembrane transporter activity molecular_function

KEGG:

id description
K05668 ABCC5; ATP-binding cassette, subfamily C (CFTR/MRP), member 5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU185895 lncRNA upstream 61114 13369713 ~ 13370781 (+) True G125887
TU185894 lncRNA upstream 62384 13367416 ~ 13369511 (+) True G125886
TU185889 lncRNA upstream 80165 13350491 ~ 13351730 (+) True G125881
TU185887 lncRNA upstream 84958 13346678 ~ 13346937 (+) True G125879
TU185885 lncRNA upstream 92829 13337754 ~ 13339066 (+) True G125877
TU186228 lncRNA downstream 84686 13543253 ~ 13543775 (+) True G126098
XR_006246953.1 lncRNA downstream 153492 13612059 ~ 13692558 (+) False LOC122323141
XR_006246954.1 lncRNA downstream 173509 13632076 ~ 13693855 (+) False LOC122323141
XR_006246952.1 lncRNA downstream 173509 13632076 ~ 13692558 (+) True LOC122323141
XR_006246951.1 lncRNA downstream 173509 13632076 ~ 13692558 (+) False LOC122323141
XM_043216745.1 mRNA upstream 1146 13427044 ~ 13430749 (+) True rpl35a
XM_043264303.1 mRNA upstream 5647 13423857 ~ 13426248 (+) True LOC122362741
XM_043264710.1 mRNA upstream 25602 13396211 ~ 13406293 (+) False depdc7a
XM_043264708.1 mRNA upstream 25602 13396212 ~ 13406293 (+) True depdc7a
XM_043264709.1 mRNA upstream 25602 13400296 ~ 13406293 (+) False depdc7a
XM_043264683.1 mRNA downstream 403 13458970 ~ 13469321 (+) False rnpepl1
XM_043264682.1 mRNA downstream 404 13458971 ~ 13469321 (+) False rnpepl1
XM_043264681.1 mRNA downstream 409 13458976 ~ 13469321 (+) True rnpepl1
XM_043216485.1 mRNA downstream 12530 13471097 ~ 13499000 (+) False LOC122322886
XM_043216484.1 mRNA downstream 12531 13471098 ~ 13499000 (+) True LOC122322886
TU185911 other upstream 1130 13427097 ~ 13430765 (+) False rpl35a
XR_006253129.1 other upstream 213549 13216657 ~ 13218346 (+) False LOC122362547
XR_006253128.1 other upstream 213558 13216484 ~ 13218337 (+) False LOC122362547
XR_006246961.1 other upstream 475950 12946841 ~ 12955945 (+) False glb1l2
XR_006246942.1 other upstream 506427 12917226 ~ 12925468 (+) False napab
TU186277 other downstream 220478 13679045 ~ 13682571 (+) True G126132
TU186336 other downstream 450997 13909564 ~ 13912800 (+) True G126175
TU186297 other downstream 481528 13940095 ~ 13941369 (+) True G126146
TU186575 other downstream 1368314 14826881 ~ 14828292 (+) True gemin7
TU186588 other downstream 1448700 14907267 ~ 14908483 (+) False LOC122322993

Expression Profile