RNA id: XM_043264737.1



Basic Information


Item Value
RNA id XM_043264737.1
length 841
RNA type mRNA
GC content 0.42
exon number 4
gene id tmem123
representative False

Chromosome Information


Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 1045194 ~ 1054735 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


cacacacacacacacaccgacagaTGCAAACCAAAGACCACCTAGTTCACAGCTCACCTTGGTCGCAGTTAGCCAGCTGTGTTGAGTAAAACCGGATATTAAAGGGTAATTTAATTTGACTAATTATAACGCGTTGCTCTGAATGACACCGAAGCGCTTCGACAAAGTCGTCGGATAATGAGTTCAGACTCAGAagacttaactttttttttttttcgttcgtCATGACTGTCGGGTAGTTTGGTGCTGTGTGCTTGACGTTTTTCGTAAAGAAAATGAACCGCTGTTTGTGTTTGGTCTACATTAGTTCCTGTATGTTTTTGTCACTGGACAGGAGAGCCGTCCAGGCCCATTCAGCCCAAGGAAAGACTTCAGTGACTGGAGCGAACATGTCCAACTATTCAACATTACTGCCCAAAGCTGAATCCACCGGCCCAACTGTGCACATCATTTCTGCATCCACAGGTGCTCCTTTTAGTAACCCAACAGCATGTCCTCGCTTCCATGCGAGTAGTTTCATTGGCGGTATGGTGCTGGCCTTTATTATCTTACTGCTCGTCACTCTGGGATACAGGTTGGCCTGCTCACCACGGGAAGTGCGCTACAGAGTCATTGAGGAACACGAtgccatcatttaaaaaaatgaagccaTTCAGGAAATCAGGATAAAACACAAGCTAGTTATGACCCGAAGAGAACGTTTTTACTATAATGTGCTTAATATGTATATGAGAAATTGTctggtttgttttatattcctaagcatttttttttttacattttcagtggATACTTGaacaatactttattttaagatgtccttGTTATGTGTTACATgtaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU182402 lncRNA upstream 125217 850653 ~ 919977 (+) False G123422
TU182403 lncRNA upstream 125217 890770 ~ 919977 (+) True G123422
TU182193 lncRNA upstream 515575 529398 ~ 529619 (+) True G123312
TU182176 lncRNA upstream 532562 511298 ~ 512632 (+) True G123301
TU182151 lncRNA upstream 568793 474750 ~ 476401 (+) False G123282
XR_006246948.1 lncRNA downstream 48472 1096463 ~ 1129331 (+) True LOC122323124
TU182487 lncRNA downstream 48472 1096463 ~ 1128705 (+) False LOC122323124
TU182490 lncRNA downstream 183775 1231766 ~ 1236921 (+) True G123491
TU182491 lncRNA downstream 183775 1231766 ~ 1236921 (+) False G123491
TU182492 lncRNA downstream 183775 1231766 ~ 1236921 (+) False G123491
XM_043264833.1 mRNA upstream 67 1040136 ~ 1045127 (+) True tbcb
XM_043264832.1 mRNA upstream 67 1040137 ~ 1045127 (+) False tbcb
XM_043216510.1 mRNA upstream 16663 1023407 ~ 1028531 (+) True qpctla
XM_043264533.1 mRNA upstream 25896 951898 ~ 1019298 (+) True sipa1l3
XM_043264534.1 mRNA upstream 25896 951898 ~ 1019298 (+) False sipa1l3
XM_043264584.1 mRNA downstream 321502 1369493 ~ 1376040 (+) True nucb2b
XM_043265139.1 mRNA downstream 361350 1409341 ~ 1413595 (+) True lmo2
XM_043264181.1 mRNA downstream 374550 1422541 ~ 1437003 (+) True alx4b
XM_043264415.1 mRNA downstream 564610 1612601 ~ 1614722 (+) True c18h11orf58
XM_043216659.1 mRNA downstream 675631 1723622 ~ 1725947 (+) True rcn2
XR_006253182.1 other upstream 222017 814764 ~ 823177 (+) False LOC122362993
TU182087 other upstream 936362 108369 ~ 108832 (+) True G123243
TU182587 other downstream 517435 1565426 ~ 1571931 (+) True G123568
TU182722 other downstream 953795 2001786 ~ 2002290 (+) True G123664
TU183022 other downstream 1254535 2302526 ~ 2305578 (+) False plin1
TU183320 other downstream 2463975 3511966 ~ 3554690 (+) True tmem170a
XR_006253139.1 other downstream 2671897 3719888 ~ 3743756 (+) False nrn1la

Expression Profile