RNA id: XM_043264738.1


Basic Information

Item Value
RNA id XM_043264738.1
length 1133
RNA type mRNA
GC content 0.39
exon number 4
gene id tmem123
representative False

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 1045194 ~ 1054735 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

cgacagaTGCAAACCAAAGACCACCTAGTTCACAGCTCACCTTGGTCGCAGTTAGCCAGCTGTGTTGAGTAAAACCGGATATTAAAGGGTAATTTAATTTGACTAATTATAACGCGTTGCTCTGAATGACACCGAAGCGCTTCGACAAAGTCGTCGGATAATGAGTTCAGACTCAGAagacttaactttttttttttttcgttcgtCATGACTGTCGGGTAGTTTGGTGCTGTGTGCTTGACGTTTTTCGTAAAGAAAATGAACCGCTGTTTGTGTTTGGTCTACATTAGTTCCTGTATGTTTTTGTCACTGGACAGGAGAGCCGTCCAGGCCCATTCAGCCCAAGGAAAGACTTCAGTGACTGGAGCGAACATGTCCAACTATTCAACATTACTGCCCAAAGCTGAATCCACCGGCCCAACTGTGCACATCATTTCTGCATCCACAGGTGCTCCTTTTAGTAACCCAACAGCATGTCCTCGCTTCCATGCGAGTAGTTTCATTGGCGGTATGGTGCTGGCCTTTATTATCTTACTGCTCGTCACTCTGGGATACAGGTTGGCCTGCTCACCACGGGAAGTGCGCTACAGAGTCATGCTTCCTACGGCTAACTGAAACTTGTATACGGACACAACTTTCGCTGATTAAAGGACAGCTCAACAGACCGTCACCGCAGAAAAGTCTCCAACACGTCAGCACGACATGACCCTGTTGACTCTCCTCAAGAGCTTTACTCATCTTGTTGCAAGTAATTCacttgttaacattttttaagcTATATTTTGTGGGCTCTTATGCTTTAATGGATAGCACAGTAGAGAAATGCCACGTGCCTTCAGACAtctttaaatttagttttttaatgtgtttttattttcatttgagttTTTACAGTCTGTTTGTTCGGTTTATTCAAGTTgcgtttttttatatgtattagttattatatttGAGCTTCCAGAGATATAGAGTTaactgatttcatttaaataaggttattaaatataaaaaaaaaaaaaaaatgcattctccatttaaaactaaaataaaatggtgcCAATTTGATtcttattttaatcagttttagaATCATGCAATTCTTTTGGGCcaaattttgttttactttttttttt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU182402 lncRNA upstream 125234 850653 ~ 919977 (+) False G123422
TU182403 lncRNA upstream 125234 890770 ~ 919977 (+) True G123422
TU182193 lncRNA upstream 515592 529398 ~ 529619 (+) True G123312
TU182176 lncRNA upstream 532579 511298 ~ 512632 (+) True G123301
TU182151 lncRNA upstream 568810 474750 ~ 476401 (+) False G123282
XR_006246948.1 lncRNA downstream 42688 1096463 ~ 1129331 (+) True LOC122323124
TU182487 lncRNA downstream 42688 1096463 ~ 1128705 (+) False LOC122323124
TU182490 lncRNA downstream 177991 1231766 ~ 1236921 (+) True G123491
TU182491 lncRNA downstream 177991 1231766 ~ 1236921 (+) False G123491
TU182492 lncRNA downstream 177991 1231766 ~ 1236921 (+) False G123491
XM_043264833.1 mRNA upstream 84 1040136 ~ 1045127 (+) True tbcb
XM_043264832.1 mRNA upstream 84 1040137 ~ 1045127 (+) False tbcb
XM_043216510.1 mRNA upstream 16680 1023407 ~ 1028531 (+) True qpctla
XM_043264533.1 mRNA upstream 25913 951898 ~ 1019298 (+) True sipa1l3
XM_043264584.1 mRNA downstream 315718 1369493 ~ 1376040 (+) True nucb2b
XM_043265139.1 mRNA downstream 355566 1409341 ~ 1413595 (+) True lmo2
XM_043264181.1 mRNA downstream 368766 1422541 ~ 1437003 (+) True alx4b
XM_043264415.1 mRNA downstream 558826 1612601 ~ 1614722 (+) True c18h11orf58
XM_043216659.1 mRNA downstream 669847 1723622 ~ 1725947 (+) True rcn2
XR_006253182.1 other upstream 222034 814764 ~ 823177 (+) False LOC122362993
TU182087 other upstream 936379 108369 ~ 108832 (+) True G123243
TU182587 other downstream 511651 1565426 ~ 1571931 (+) True G123568
TU182722 other downstream 948011 2001786 ~ 2002290 (+) True G123664
TU183022 other downstream 1248751 2302526 ~ 2305578 (+) False plin1
TU183320 other downstream 2458191 3511966 ~ 3554690 (+) True tmem170a
XR_006253139.1 other downstream 2666113 3719888 ~ 3743756 (+) False nrn1la

Expression Profile