RNA id: TU203682


Basic Information

Item Value
RNA id TU203682
length 1733
lncRNA type inter_gene
GC content 0.37
exon number 2
gene id G137932
representative True

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 12195529 ~ 12197425 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TACTCTCTTACCAAACTGCGAAGAAAAACATCATAACATGCATCAGAATGACGCAGAAAATGACTGATTTTATTAACAGCCAGTGACAGGGTTACAATGAGATCTAAGCATTCTGTTGAAAAGTACTTGAAATGACTGACATGTTGTAATGAGGGAATActttaatgacaaaatgctCGGGCCCAAGTGTACGagtctttatttaattcatCTAATGCAGGTCTGTGTTGAAATGTATTGCTGGTGTGCATGCGTAACATAACAGGCAATATCTGAAACCACATGAATATTAACATTAAGCAACAGAGGTTTATACAGGCCATttaaaaatagagaaataagaaataatttaaGAATGGGCAGCTAAAAGTCAGCTGTTAAAGTTTAACTGAATAGATTATTTGTCTCTTATGTTGTGCCATTTAAAAGTCAGTATTGACACAAAGTTAACGTCCACACAACAGGCAATCCCTAGCATTACCATAAAATTGGGGGAAAAAGCAAGGATATTTCAGGGACTGTGcttattgaaatgtatgcacCTGTTCTACCTCACAATGtagtgaaaaatacaaaaagtactTTGCTGATTATGCTGTTAAACAGAGACAGATGTGAAAATAGAAATCTGTTTCATTAGGAAATGTctgggaatatttttttttctttaaagtgctACATTGAAATCATTGGTATAGTTAACCAAATAAAGCCACATAACCAAACTAACGAGAGCACATCCATCACTTTtctatcaaaatgcatttttctgtttctcCCTCCATGTTATCTATCAGCCTCTGTTTTTCATCCTCTGGCATCAGAGTCTCTGGATTCAAATGAAAGAATCCCCTACGAAAAATATAGATCTGTGTTCACATGAGGGGAACAGAAGATCCAGGATCTTAATGATGACAGCTGAACCAGCAACACCAACCACCACCACCCACATGATCAAGAAGAAGAGTGGGATAGAATCAGACCAGAAGCGCCTCAGTTTATCTCTTAGCCCCTCGACCCACTGACACGCCACctgccacacacacaataacaacaCATGAGGAAAATGACACTACTGAGAAACAGAACATGTACAAAATGAGGAGACTGAGGTCATCcagagtttctagttttgaaaatctattaattatatttacataaaagttTGGGAACAGTAAGCTTTTTTATGTTAAGGTCTGCCGTGTTTCCCaaagaaaaacagtaatattgtgaaataggaatttaatttagaataacCGTTTTCTAgttgaaattattataaaatgtactcCTCTAATGGCAACgctgtcacataatccttcagtttcagcttcatTTTTTAGTGGAAACTGACTTTTTTGGAATTCTTTCATAAACAGAAAGTTGACAAGAACCacatatatttgaaatagaaatattctgTAACGAAtctaaaacattgtaaaaacgTCTTATATGtgacattataatttaaaatccaTTAAATAGGGTCCGAGAGTGACCAGTACGCAGTCACTTACACTATAGGAAGACAAGGACCCACTCAGAGGAGACCCAGGCAGCAATGAATCTGAAGtcccttcctcttcctctctggACTCATACAAGGTTTCAGGGTCCATCCGCAACGGTGTTTCAGGAAGTTTCCCTGGAGCTGCGATCTCCTCCTGAGTGGTCTCTGCATGTTTGAGTAGATAGTGGCTGGTGGTGTTAAGCACTTGGTCTTCAACTGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU203708 lncRNA downstream 1170 12053777 ~ 12194359 (-) True G137944
TU203678 lncRNA downstream 159407 12035478 ~ 12036122 (-) True G137930
TU203664 lncRNA downstream 181553 11945258 ~ 12013976 (-) True G137916
TU203535 lncRNA downstream 301640 11893267 ~ 11893889 (-) True G137831
TU203525 lncRNA downstream 356163 11838470 ~ 11839366 (-) True G137822
TU203801 lncRNA upstream 676281 12873706 ~ 12881309 (-) True G138016
TU203836 lncRNA upstream 922114 13119539 ~ 13119773 (-) True G138042
XR_006247251.1 lncRNA upstream 1016646 13214071 ~ 13260480 (-) True LOC122325041
TU204008 lncRNA upstream 1063494 13260919 ~ 13261962 (-) False LOC122324483
TU204052 lncRNA upstream 1170444 13367869 ~ 13368510 (-) True G138186
XM_043219075.1 mRNA downstream 10104 12181779 ~ 12185425 (-) True LOC122324548
XM_043219074.1 mRNA downstream 14183 12177900 ~ 12181346 (-) False LOC122324547
XM_043219073.1 mRNA downstream 14183 12177900 ~ 12181346 (-) True LOC122324547
XM_043220525.1 mRNA downstream 131506 12059675 ~ 12064023 (-) True LOC122325482
XM_043219029.1 mRNA downstream 284794 11907560 ~ 11910735 (-) True cbr4
XM_043219070.1 mRNA upstream 29 12197454 ~ 12202920 (-) True katna1
XM_043220527.1 mRNA upstream 44376 12241801 ~ 12280312 (-) True mdn1
XM_043219993.1 mRNA upstream 97707 12295132 ~ 12380554 (-) False bach2b
XM_043219991.1 mRNA upstream 97707 12295132 ~ 12380553 (-) True bach2b
XM_043219995.1 mRNA upstream 97707 12295132 ~ 12362533 (-) False bach2b
TU203468 other downstream 512211 11682405 ~ 11683318 (-) True G137773
XR_006247366.1 other downstream 565168 11630241 ~ 11630361 (-) True LOC122325627
XR_006247365.1 other downstream 565688 11629720 ~ 11629841 (-) True LOC122325626
XR_006247367.1 other downstream 566280 11629128 ~ 11629249 (-) True LOC122325628
XR_006247255.1 other downstream 827039 11366923 ~ 11368490 (-) False gsx2
TU203734 other upstream 21338 12218763 ~ 12219639 (-) True G137967
TU203715 other upstream 25385 12222810 ~ 12224270 (-) True G137949
TU203701 other upstream 48797 12246222 ~ 12247010 (-) False mdn1
XR_006247291.1 other upstream 1228050 13425475 ~ 13436351 (-) False cracd
TU204189 other upstream 1467081 13664506 ~ 13692007 (-) True G138285

Expression Profile