RNA id: XM_043219995.1


Basic Information

Item Value
RNA id XM_043219995.1
length 7056
RNA type mRNA
GC content 0.45
exon number 5
gene id bach2b
representative False

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 12295132 ~ 12380554 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTGGCAGGGGATGGAGTGTTTACCACAGCTGCAGTCACAGATGGTACGGTACAGCAGCCTTGCGATGATCTGAAGCTAGAGAAACATATGGGAAATAGTCGAGGAATGCTTCGCTCATGCCTGCGAGGGTATATGCGCAAATGCATTTCGGGATGACATTGGAGGACATGCGCTCAAGACTTCACTAGAGAGAGATCTCTTGACCTGACAAAGGGTGTGAGCGGTATGTCCGTGGATGAGAAGTCTGAAGCTCCCATGTACGTGTATGAGTCGACGGTGCACTGTACCAACATCCTGCTGGGTCTGAATGAGCAGCGGAAGCAGGGCCTGCTCTGTGATGTGACCGTGCTGGTGGAGGGGAAGGAGTTCCGCGCACACAGGGCTGTCCTAGCGGCCTGCAGCGAGTACTTCCTACAAGGATTCGTCACCCAAAGTGACAATGAACTGGTTCTCAGCATGCCAGAGGAGGTCAGTGCCCGGGGATTCGCTCCTTTGTTACAGTTTGCCTATACGGCTAAGCTGCTGCTCAGCAGAGAAAACATCCAGGAGGTCATCCGCTGTGCTGAATTCCTGCGCATGCACAACCTGGAGGACTCCTGCTTTCGCTTCCTGGAGGCCCAACTGCGCAGCGAGGAAGACGGCCTGGTCCTCTGTCGCAAGATGGCATCTGAGAGCAATCACTCGGAGGACGAAAGCATGCAACCCGAATTGCTGACGACAACGCCAACTGCAGTGACCCTGTCTGGCTCTCCGCGCTCTCGCCGCGAACACGCCCTTAACTCCTTGCGGCGGCCAGACCACGAGCGGCTGGCAGCAACAGAGGAGTTCACTGATGGACAGATGGACTTTGAGCGACACGGCACCTCAGACCTGCCGCGATGCCCCAAATACAGGAAGTACCAATGGGCATGCAACAAGCACAATAACGACACCTCTTCACACACCAGTACCTCAGGTTTTCCAAGCACATTCAAGGAGATGAACCGGCCGGCTGTGATGCAAATCAAGCAGGAGCCACGCAGCGAGGAAGAGTCCATCTCGCTTTGCCTGTCAGGGGATGAGCAGGACGGTGGTGAAAAGGACGGTGTGGCCGAGATGGAGCTGGATGGTTGCATTGCAGTGGACCAACCCAAAGGCAGCAGCAAGTCACCCACCTGCCTACGAACTCTCTTTAAGAAGGATCTGCCGAGCACACCCCAGCAGCTCTTTGCTAACAGACTTGTCAATGCCCAGGATAAAGGAACCACTCAGGGAGACCACAAAAAAGACTACAGGCCTTCGCTTGGCAATGAGCTTGGCGTCCCTGTGGCGTTCCCCAAAGACGCAGATGGTTTCCCGCCAGGGCTTTCGTTGAAGTCTGCTCCCTGCGATGGTGTGTGCAAGCAAGAGGTGGAGCCGGACCGCCGTAGTGTCATCTTCTCCTCAGGGCCCTGTGACCGACTGGGTACGCCCACCCACTCCCATCCCAGCGGGAACTCACTGGAGAAGGAGCTCTCAGAACACATGCCAAAGGGATTGTGGGCCGGTGCCAGCCAGTCCTTCCCCAGCTCCCAGACCTACTCCCCCAGCACCACAGCCAACGACCCACCCCTGCTTTGCCGCCAAAGGCCCAATACCAGCTGCCCAGTGCCAATCAAGGTATGCCCTCGATCGCCCCCCTCAGAGACTCGAACTCGGACCTCCAGTTCCTGTTCGTCGTATTCTTACGCAGAGGATGGGAGCGGCGGGTCCCCCTGCAGCCTGCCACAGTTTGAGTTTTCGTCCTCGCCTTGCCCCAATGTGACACGGTGTCTCACGACTGACCCGCAAGAGGCAGGCGGTGGGACGGATGCGCTATTTGCACGAGTTCGGCCCCAGATAAAGTGTGAGCAGTCGTATGGAACCAATTCCAGTGATGAGTCAGGGTCCTTTTCGGAGGGGGACAGTGAATCATGTCATGCTCGAGAGCAAGGCCCTGAGGTCAAGCTTCCGTTTCCAGTCGATCAAATCACAAATCTTCCACGCAACGACTTCCAAATGATGGTGAAAATGCACAAGCTGACCTCGGAGCAGCTGGAATTTATCCACGACGTGCGCAGACGCAGTAAAAACCGCATCGCGGCCCAGCGCTGCCGCAAGAGAAAACTTGACTGCATCCTGAACCTTGAGTGTGAAATACGCAAACTGGTGTGTGAGAAGGAGAAGCTCTTAACAGAGCGCAACCAGTTGAAGGCGTGCATGGGAGAGTTATGGGAAAATTTCTCCTGTCTGTCTGAGGAGGTGTGTCGAGACGTGCAGCTGAGCCCAGAACAGGTCCATCACTACTGCCCCATTCTGCGTCCCGGCAACCAGGCCCTGCCCACCGGCAGCATCGACCTCACCACTTGCTCCACCCCCGAACAGAGCTTCCACAAATCGGCAACAGCAAAAGACGGTCAACCGCGACCGGCCCAGTGGAAGACCGGAAACGGGTCCGAAGACGCAAGCAACGACAGGGAGGAGCAAGAACCCGGCTCCACCTACCTGGAGGCGGGGCTGTCCCTAGAACAGTCCAATCAGACGGTGACAGTAGACTTCTGTCAGGAGATGACAGATAAATGTACAACCGACGAACAGCCCAACAGAAAGGACTGTACCTAATGACGGTGGTTTCTCTGTGTTGATttgttttacaatgttttttttattatttaatttagttacgTCTTCTGACAAACCCTCAAAAATCGAGGGCTGTTGAGATGGCCAGCCTctgccagtgtttttttttttttttatatatatatatacatatatatatatatttatgtctttttattgtctttttttaaaacaaaggttGACACTACAGTTGTCTTAACAGCAGCAATACTGTTCTCCAGGTTCTCTCTCATTCAGCCATGGCAGAGTGGCTGAGACCTTCTCACAGAACTTCACGATGGTGCTACACCTTTCCATGACAGTGGACAGCAACACTGTCTGTTTCCAATTACAGTCCATTCAGATGGGATGGGCTCTGACCACATCTCAAATTCAGACCTCTACGGACCTAgcagcagctttttgcttctctctctctctctctctctctctctctccttccctctctcCACCCCACCTCCCTTCACTATTCCTGCCCTCTACCTCTAAATCTCTACcatcctcctctcctctcttagacactctctttctctttctctttctctttctctttctctttctctttctctttgtggCCCTTGTCACAGTAAATTCAAACTCAGGAAATATTCTGAATGTTCAGTATAActcatgaaaaagaaaaaaataatacagatgttttttttttttttttttttgtttgtttgttttttacagcaGCTAGACTGTAAATGTCTATATGCAAAAATGTCTTCTGCATCATACGTTTATAGTGTCTGTGTACCGCAACACTTAATTTGTACAGATGGTGGTATCTAAAACATTCCTCCTTTGCCTTCCACAGCACTGATACGAAAGAAAGTACGATTCGCGTCATAGTTTCGCCCACCTTTTTTGCGTCAGCAATACTGTACCATTGGATGTTTTCGAGAAAGTGCTCGCTCGGCAGAAAGCGTATTGTAAATAGTGCGGCGCATGGAGACGGTTTCGGTAATATTGTACAGGTAGAACTTTagatggctttttttgttttttctttgctttctttttttctctgggGTTTTATCAAGCACCTTTTTGTCACGAAGGGAAAATCGTTGCTGTTTCCTGTCTCAAATGAATTCCCCATGACGATGGGTGTGCTTAAACTCAGGAAACTAGCATTCTTACActcacgcatgcacacacacgctcgcatACGAACCCCCCCGCCCCCCGGTGCAGCGCATAGAGCCCCTTGCATGTAATTTGGATGTAAATGGTGTGCGTAGTGGTGAGCTGTTCtcctttaaatgtgaaaaagtgcTCTCTGAGGAAACCTTattttttatcagtatttacAGTGTGTTCACGGACACCTCCGAACAGTGTTATCTAAAACAAACGTCATCAAGATCCCACACCCTTTCAGTTTCGGCCCACTTTACCGCTCtgacaggaacaggaaatgaCGTTGAAGTCAATTAAAGGGCCTCGCCcttgactttttaattttttattttttcccccctcagcACTCGTTGACCGTTTAGCACTTCAGAAAGGGTagatttctttttcaggacccTAAAAAGTCTGAAATTGAAGCACTTAACGCTGACACTTAAAAGCGTCTTTTCAGGCAGATGATCTTTAACGACTTGGTATCTTATAAAGAACGTTTtcaagtttaaatgaaaaagataaaGGAGTGTTCAAACTGCATATTTATGGAAGACACTAAAAAAGAAGCATCGGAAATCTGATCTGAGTTGTATGGAATAAGCCCATTCTTTAAAGTCGTCCTATATTTCCCTTTATTGTACATTTGTTAGACACGTATATCCATACTAATGGGATTGCATGCtgcctgtatgttttatatagttTGTTTATAGAGTTTCTTTGCCTCAAAATGTAGGCCTCGGAAAAACAGTTCGATGGTTGTTTGGTTGAGCATAAACTGAgcgtgtttttctttaaaaaaaaaaaaaaaaatgaaaatgaaaagaaaaaaaattggatcTCCCAACAGTTGGGAATGCCTCTCAGTTGACACAGTTCTATATTATTTgaatgacctttgacccctaGAGCTCTATGTATGCGTGCTTGTGTATTTGCCAGTCTGATAAATATTCAGACGCGTTTCAAGTTGTAATGCATCCCCTCTCCTACTCGtatgcaagcacacacacacacacacacacacacacacacacacacacacacacactgggtgGAGTGTCTCTCCTGGGATGTAGAATCTAGAGGTGTTGTGATGGATAGTtgtgctgttgttttcattgtggatctttttctctttctctctttctctttttttctaaagaaattGAAACAGTATTTGCCATTTCTAAATTGTAATCAGGTACAAGACTAGAACTAAAGATTTATGGGTCCAAGTGGACATTTGTGCACACATATGCAAATCATCCCTATAATGATGCGTTTTTCTTATTTCATGTTGTATAAATAACGAATAATGAAGCGTGGAAAGCATGAACTTCCACTTGACAAGCACACTGTCGTACACTTGAGAATCTATGTCCacaattttgacatttctgaagaaacaaaaaaacaaaaaaacgaaaggTCACACCTGCATCAAGGCgatccaaaaacattttctcaaatttgcttttgtttgcgTTCCTCGCATAGcaatgtgtttgttgtgttcttgtttaTTTGTGCCGTCTGTGATACGGCTGACTCCTCATGCTTGCACACTTGGCCTTAAGAGCCTGGGGATGCTTCGGTTCAGGCCGACGTTTCGATGCAGATGTGGAAGAAACCGGGAGTCTGGGTGACACGGATTGGAATTCTGACCTCTGTTAGCCTCTGTTACTAAAAGCTGCATCATGTTTGCCTCCACGGTGACTTCAAAGGTTCGCCCTGGTCACAGAAAGCCTCACAGGTTAAATAAGCTTATTAGCTGTCCTCTCAACAACACGTCTTTgctagttttgttgttttacagacattttattttcgTATCGGACTCGTGGTTGCTCTTGTATCTTGTCTCAGGGTGCgtgcctactttttttttttttatttggtccTCACGCGTTTTTTGATAGTAGCTGGTGAGCTCAGCTTCCATTTGCGTATTTTTGTGTCttgcgtttttttttgtgtgtcctCTTATAAAGCTAACGGGGTGGGTagcatgattttcttttttgagtttttaagcTAAGAATAATTGATTCGTAGAGAAAACCAACTACATTTGCAcaattattttggattaaaaccCAACAAGGGCTATGTAATATCTCAAAATAAAACCCAGCAATTAGTTTTTGGTTGTCAATTGGCTGCTACAGCTAATCGTTTAAGCTTTCGATTTGCAATTGCGTTCAAAAGACGTGTATTTTAAGCTTTGTTAGTGTATTAAGAACTAATACTGTACAAGAAAACACCCTACATGTCTTCATCTATGTAAGCTCCCATTTGATGtcgtttgtttaaataatttggtTTCGTTCGTGCTGCTCCTCTGAAATATGAACACTGGCGTTCCAAAGCGTTGCTCAAAAACATGCCTTTTTCACAATTTGCTtaactttataaaacatttagtattcGGACTGATAACGGCATaaagaaaaaaggcaaaatgtttacaaaaaggTGTCGTGTTTTACGAGAATTTTGCCATGTACATAGAAAGCACGAGGTTCGTTCGAATGGATAGGTTTAGCATTCTGTCTCTTTGTTTTGTACGTTTTTACAAGCGAACAGAGAAATGGCCGTTTGATAACTATGCTCCTTTTCCTCAAGTTGTCTTTTTGCCCGACGGGGATGCTCCAGTGTACCATGAATACAAAGTGCACCTCCAACTTTGCCTTAGAACTTCCAGAGGCCATAGTTCACATTCAAGTGAAGTGTGTATGCAGGGGCTGTGAGCCCCCATGTTTCGGCTAGCAGAGcggactctctctctctcacacttaTCTACCTGTGAAATCCTTCATACCTCTCATTACTGGTCAATGACTGTATCAGCAAACTGCATCAGGTGTTTTTTCTACATGCTTTTTACACAGATTATATGGATTATTGTATTGGTAGATTTTGGTGCATCATTTTTAATGGAATAGCTCTTTGGCTTGTAGTCACACgagttgtttttctctctctatctctctttctgacTCTTTATCGCATTTTTTCTAGAAGActgttttgtgttaatattgTCGATTTGAGATAGCTGTTTCTTTGCTTATTCTGTACTAagagtttttactttttttcattttgaaatgctaCATGACCCTAATGAATTTAATGACTTAAAAACCATTGTACATACGGTATTGTGCAGGActcattttcatgcatttcaatTGCTAGTGTTATATAAATGACAGATTTTGTCTAGACACCATTTCTGTTtatgaaataaagaaacatatCATGTAA

Function

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU203682 lncRNA downstream 97707 12195529 ~ 12197425 (-) True G137932
TU203708 lncRNA downstream 100773 12053777 ~ 12194359 (-) True G137944
TU203678 lncRNA downstream 259010 12035478 ~ 12036122 (-) True G137930
TU203664 lncRNA downstream 281156 11945258 ~ 12013976 (-) True G137916
TU203535 lncRNA downstream 401243 11893267 ~ 11893889 (-) True G137831
TU203801 lncRNA upstream 511173 12873706 ~ 12881309 (-) True G138016
TU203836 lncRNA upstream 757006 13119539 ~ 13119773 (-) True G138042
XR_006247251.1 lncRNA upstream 851538 13214071 ~ 13260480 (-) True LOC122325041
TU204008 lncRNA upstream 898386 13260919 ~ 13261962 (-) False LOC122324483
TU204052 lncRNA upstream 1005336 13367869 ~ 13368510 (-) True G138186
XM_043220527.1 mRNA downstream 14820 12241801 ~ 12280312 (-) True mdn1
XM_043219070.1 mRNA downstream 92212 12197454 ~ 12202920 (-) True katna1
XM_043219075.1 mRNA downstream 109707 12181779 ~ 12185425 (-) True LOC122324548
XM_043219074.1 mRNA downstream 113786 12177900 ~ 12181346 (-) False LOC122324547
XM_043219353.1 mRNA upstream 28068 12390601 ~ 12405649 (-) True map3k7
XM_043219354.1 mRNA upstream 28068 12390601 ~ 12405637 (-) False map3k7
XM_043220042.1 mRNA upstream 652410 13014943 ~ 13089645 (-) False epha7
XM_043220040.1 mRNA upstream 652410 13014943 ~ 13089645 (-) False epha7
XM_043220037.1 mRNA upstream 652410 13014943 ~ 13089645 (-) False epha7
TU203701 other downstream 48122 12246222 ~ 12247010 (-) False mdn1
TU203715 other downstream 70862 12222810 ~ 12224270 (-) True G137949
TU203734 other downstream 75493 12218763 ~ 12219639 (-) True G137967
TU203468 other downstream 611814 11682405 ~ 11683318 (-) True G137773
XR_006247366.1 other downstream 664771 11630241 ~ 11630361 (-) True LOC122325627
XR_006247291.1 other upstream 1062942 13425475 ~ 13436351 (-) False cracd
TU204189 other upstream 1301973 13664506 ~ 13692007 (-) True G138285
TU204531 other upstream 2081059 14443592 ~ 14445844 (-) False LOC122324589
TU204892 other upstream 2630566 14993099 ~ 15015183 (-) True srsf5b
TU204893 other upstream 2630566 14993099 ~ 15015183 (-) False srsf5b

Expression Profile