RNA id: TU223418



Basic Information


Item Value
RNA id TU223418
length 506
RNA type TUCP
GC content 0.46
exon number 1
gene id G150965
representative True

Chromosome Information


Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 8988186 ~ 8988691 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTAGTTTGTTAGGCTTTAGGAAACATAGGGCCCAAAAAAGccataaaactattaaatatgacAATGTTACCATTTAATATCACACTGCGCCAAACCAAAACGTTTGATGCCACCGCCATCCAGCCACAGGTGCCATGTTTGATTTGCAAATCGTCAAGCTACAGTTTCAAAGTAGCTTCCCTAACAGCTGGAAAACTACAAGAGATGCACGGTCCAAGTTAAACACTGTGGACAACACAATGCAGCGAACGTACCGTCTGAATGGGTCCAGATGTGGAGAGTCTGGGTCTGGCCGCAGTGTCTCTGGCCACCACCAGCTCCACTCGGTCTCTCTGCTGCTGGAGGAGAGCGATGGCCTGCTGCTGCGTCACGCTCTGATCCAGAGGAATCCCGTTTATCGCCAGAATCTGATCGTTTTCCTGCAATCTTCCATCCCTGGAGATAATAAATATCACTATTATTATCCATGTGATTAATTTGGTCCTGCTTTATACTGTGTTCCTAAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU223417 lncRNA upstream 5830 8982116 ~ 8982356 (+) True G150964
TU223416 lncRNA upstream 6421 8981487 ~ 8981765 (+) True G150963
TU223415 lncRNA upstream 14280 8973646 ~ 8973906 (+) True G150962
TU223411 lncRNA upstream 14901 8966543 ~ 8973285 (+) True G150959
TU223405 lncRNA upstream 40476 8947116 ~ 8947710 (+) True G150953
TU223420 lncRNA downstream 6515 8995206 ~ 8995483 (+) True G150967
TU223423 lncRNA downstream 24843 9013534 ~ 9013852 (+) True G150969
TU223424 lncRNA downstream 37210 9025901 ~ 9029910 (+) True G150970
XR_006247700.1 lncRNA downstream 80041 9068732 ~ 9071172 (+) True LOC122327612
TU223441 lncRNA downstream 156520 9145211 ~ 9147388 (+) True G150983
XM_043222327.1 mRNA upstream 95987 8890622 ~ 8892199 (+) True pdzk1ip1
XM_043223371.1 mRNA upstream 101758 8880269 ~ 8886428 (+) False tal1
XM_043223444.1 mRNA downstream 7280 8995971 ~ 9004905 (+) True tm2d1
XM_043222439.1 mRNA downstream 209333 9198024 ~ 9223536 (+) True frem1b
XM_043222440.1 mRNA downstream 209358 9198049 ~ 9223536 (+) False frem1b
XM_043222443.1 mRNA downstream 235119 9223810 ~ 9227301 (+) True atpaf1
XM_043222442.1 mRNA downstream 239717 9228408 ~ 9235230 (+) True rab3b
TU223398 other upstream 66219 8921698 ~ 8921967 (+) True G150946
TU223397 other upstream 68406 8919279 ~ 8919780 (+) True G150945
TU223385 other upstream 85875 8901143 ~ 8902311 (+) True G150940
TU223378 other upstream 96105 8890643 ~ 8892081 (+) False pdzk1ip1
TU223279 other upstream 370581 8614289 ~ 8617605 (+) True G150862
TU223769 other downstream 466610 9455301 ~ 9530165 (+) False march2
TU223817 other downstream 588988 9577679 ~ 9580151 (+) True G151232
TU223952 other downstream 899509 9888200 ~ 9893489 (+) False borcs8
TU223980 other downstream 934856 9923547 ~ 9963634 (+) False LOC122328159
TU223981 other downstream 939988 9928679 ~ 9963634 (+) True LOC122328159

Expression Profile