RNA id: TU224294


Basic Information

Item Value
RNA id TU224294
length 317
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G151592
representative True

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10666056 ~ 10669212 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tgtcacggttgtgtggtaagcacgagagcacacaacgagagaaaagtaaacttaaacggatttaatttcaaaatggtaaaataaagatacaaaaaggcaggcaggtagaacaggcaggcaggataatcACAGGtaaagacatcaggtaaggacctcgacgctcggaccaacagaactcaaaacacaggacttaaatacacagggtaattgacgagacacagctgatgacaataacataattaacacagagggaaggtagggcacagggagcacatggcatgaaacaaaaacataaacacagagtccagagatgtgac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU224196 lncRNA upstream 245020 10388550 ~ 10421036 (+) True G151516
TU224164 lncRNA upstream 317170 10347829 ~ 10348886 (+) True G151487
TU224024 lncRNA upstream 476884 10188578 ~ 10189172 (+) True G151382
TU224015 lncRNA upstream 478473 10185635 ~ 10187583 (+) True G151373
TU223986 lncRNA upstream 503610 10151480 ~ 10162446 (+) True G151345
TU224310 lncRNA downstream 32410 10701622 ~ 10702328 (+) False LOC122327757
XR_006247710.1 lncRNA downstream 32661 10701873 ~ 10709748 (+) True LOC122327757
TU224309 lncRNA downstream 38187 10707399 ~ 10709755 (+) False LOC122327757
TU224316 lncRNA downstream 41301 10710513 ~ 10711972 (+) True G151603
TU224372 lncRNA downstream 108515 10777727 ~ 10840314 (+) True G151624
XM_043223909.1 mRNA upstream 202859 10457205 ~ 10463197 (+) True rgmd
XM_043222316.1 mRNA upstream 239749 10422888 ~ 10426307 (+) True hsd11b1la
XM_043223903.1 mRNA upstream 247840 10413349 ~ 10418216 (+) True LOC122328195
XM_043223901.1 mRNA upstream 253602 10410257 ~ 10412454 (+) True LOC122328194
XM_043223451.1 mRNA upstream 257573 10407145 ~ 10408483 (+) True LOC122327820
XM_043223318.1 mRNA downstream 47028 10716240 ~ 10720317 (+) True hmg20b
XM_043223231.1 mRNA downstream 51888 10721100 ~ 10759871 (+) True unc13a
XM_043223234.1 mRNA downstream 51888 10721100 ~ 10759871 (+) False unc13a
XM_043223232.1 mRNA downstream 51888 10721100 ~ 10759871 (+) False unc13a
XM_043223235.1 mRNA downstream 51888 10721100 ~ 10759871 (+) False unc13a
XR_006247720.1 other upstream 672615 9970622 ~ 9993441 (+) False gatad2ab
TU223980 other upstream 702422 9923547 ~ 9963634 (+) False LOC122328159
TU223981 other upstream 702422 9928679 ~ 9963634 (+) True LOC122328159
TU223982 other upstream 702422 9931139 ~ 9963634 (+) False LOC122328159
TU223952 other upstream 772567 9888200 ~ 9893489 (+) False borcs8
XR_006247780.1 other downstream 39832 10709044 ~ 10709110 (+) True LOC122328232
TU224353 other downstream 136840 10806052 ~ 10837365 (+) True G151620
TU224351 other downstream 146923 10816135 ~ 10837365 (+) False G151620
TU224458 other downstream 249848 10919060 ~ 10921928 (+) False si:dkey-172o19.2
XR_006247707.1 other downstream 649477 11318689 ~ 11323940 (+) False mier2

Expression Profile